kert 33701365be add Nature figure standards: palette, Altair theme, DAG colors ...

Create styles/nature.py with accessible 8-colour palette (Paul Tol
bright scheme), Altair theme registration, matplotlib rcParams, and
Cytoscape style helpers — all conforming to Nature Research figure
specifications (bib citation 9ASETLJ4).

Retrofit acodb_explorer.py: replace all hardcoded set2/hex colors
with PALETTE references, enable the Nature Altair theme on import.

Update src/aco/dag.py to import schema colors from the shared
styles/nature.py module instead of maintaining a separate Tableau 10
palette.

fix #45, fix #46, refs #47

2026-03-21 13:55:53 -04:00

..

.marimo-config

full dark theme for marimo, PFS payment calculator notebook, marimo check pre-commit hook

2026-03-07 13:20:52 -05:00

.marimo.toml

setup full stack of microservices for refinement

2026-02-05 21:29:28 -05:00

acodb_explorer.py

add Nature figure standards: palette, Altair theme, DAG colors

2026-03-21 13:55:53 -04:00

api_explorer.py

add marimo API explorer notebook for interactive endpoint testing

2026-03-12 20:20:10 -04:00

bib_explorer.py

wire remaining hardcoded paths, fix truncated quality measure docs refs #1

2026-03-12 14:33:43 -04:00

cms_quality_measures.py

wire stack.toml into dev scripts and notebooks refs #1

2026-03-12 14:17:13 -04:00

Dockerfile

fix deploy image builds: notebooks COPY path, docs pydantic fallback (fix #44)

2026-03-13 11:25:01 -04:00

gpu_test.py

Add GPU-accelerated notebook and Zotero desktop services

2026-02-04 00:48:22 -05:00

home-page-DUMF8ZY4.js

updated styles for homelab

2026-02-08 22:45:09 -05:00

nessie_tutorial.py

initial pass at a complete pipeline

2026-02-07 16:18:44 -05:00

pfs_calcs.py

wire stack.toml into dev scripts and notebooks refs #1

2026-03-12 14:17:13 -04:00

polaris_tutorial.py

initial pass at a complete pipeline

2026-02-07 16:18:44 -05:00

sample.py

full dark theme for marimo, PFS payment calculator notebook, marimo check pre-commit hook

2026-03-07 13:20:52 -05:00

sql_generator.py

update sql_generator notebook: schema-only mode, all 12 pipelines

2026-03-11 15:06:36 -04:00

zotero_tutorial.py

wire remaining hardcoded paths, fix truncated quality measure docs refs #1

2026-03-12 14:33:43 -04:00