stack/tests/bib/test_pincite.py

"""Tests for bib.pincite — pinpoint citation system."""

from __future__ import annotations

import textwrap

import pytest

from bib.pincite import (
    Pincite,
    _classify_locator,
    build_citation_graph,
    check_pincite_keys,
    format_pincite_block,
    inject_pincites_into_source,
    list_pincites,
    parse_pincites,
    upsert_pincites,
)
from bib.store import Store

# ── Fixtures ─────────────────────────────────────────────────────────


@pytest.fixture
def store(tmp_path):
    """In-memory-like store using a temp database."""
    db = tmp_path / "test_bib.sqlite"
    s = Store(database=str(db))
    return s


@pytest.fixture
def store_with_items(store):
    """Store with two items for pincite testing."""
    from bib.item import Source

    store.create(Source(key="JX46GQ9K", title="Tag vocabulary item"))
    store.create(Source(key="9ASETKJ4", title="Nature citation standards"))
    return store


# ── Parse ────────────────────────────────────────────────────────────


class TestParsePincites:
    def test_basic(self):
        doc = ":pincite:`JX46GQ9K p.14` -- NDC validation rules"
        result = parse_pincites(doc, "mod.fn")
        assert len(result) == 1
        assert result[0].item_key == "JX46GQ9K"
        assert result[0].locator == "p.14"
        assert result[0].note == "NDC validation rules"
        assert result[0].fn_path == "mod.fn"

    def test_no_locator(self):
        doc = ":pincite:`JX46GQ9K`"
        result = parse_pincites(doc, "mod.fn")
        assert len(result) == 1
        assert result[0].locator == ""

    def test_no_note(self):
        doc = ":pincite:`JX46GQ9K p.14`"
        result = parse_pincites(doc, "mod.fn")
        assert len(result) == 1
        assert result[0].note == ""

    def test_section_locator(self):
        doc = ":pincite:`9ASETKJ4 §3.2` — exclusion criteria"
        result = parse_pincites(doc, "mod.fn")
        assert result[0].locator == "§3.2"
        assert result[0].locator_type == "section"
        assert result[0].note == "exclusion criteria"

    def test_cfr_locator(self):
        doc = ":pincite:`ABC23456 42 CFR §414.22` -- payment rates"
        result = parse_pincites(doc, "mod.fn")
        assert result[0].locator == "42 CFR §414.22"
        assert result[0].locator_type == "cfr"

    def test_fr_locator(self):
        doc = ":pincite:`DEF78923 90 FR 86252` -- final rule"
        result = parse_pincites(doc, "mod.fn")
        assert result[0].locator == "90 FR 86252"
        assert result[0].locator_type == "fr"

    def test_multiple(self):
        doc = textwrap.dedent("""
            :pincite:`JX46GQ9K p.14` -- first
            :pincite:`9ASETKJ4 §3.2` -- second
            :pincite:`ABC23456 Ch. 12` -- third
        """)
        result = parse_pincites(doc, "mod.fn")
        assert len(result) == 3

    def test_deduplication(self):
        doc = ":pincite:`JX46GQ9K p.14` -- first\n:pincite:`JX46GQ9K p.14` -- dupe"
        result = parse_pincites(doc, "mod.fn")
        assert len(result) == 1

    def test_empty_docstring(self):
        assert parse_pincites("", "mod.fn") == []
        assert parse_pincites(None, "mod.fn") == []

    def test_no_pincites(self):
        doc = "Just a plain docstring with no citations."
        assert parse_pincites(doc, "mod.fn") == []

    def test_invalid_key_charset(self):
        # 0, 1, O, L are not valid Zotero key chars
        doc = ":pincite:`00000000 p.1` -- bad key"
        assert parse_pincites(doc, "mod.fn") == []

    def test_em_dash(self):
        doc = ":pincite:`JX46GQ9K p.14` — em dash note"
        result = parse_pincites(doc, "mod.fn")
        assert result[0].note == "em dash note"


# ── Classify locator ─────────────────────────────────────────────────


class TestClassifyLocator:
    def test_page(self):
        assert _classify_locator("p.14") == "page"
        assert _classify_locator("pp.8-12") == "page"

    def test_section(self):
        assert _classify_locator("§3.2") == "section"

    def test_cfr(self):
        assert _classify_locator("42 CFR §414.22") == "cfr"

    def test_fr(self):
        assert _classify_locator("90 FR 86252") == "fr"

    def test_chapter(self):
        assert _classify_locator("Ch. 12") == "chapter"

    def test_paragraph(self):
        assert _classify_locator("¶4") == "paragraph"

    def test_empty(self):
        assert _classify_locator("") == ""


# ── Store operations ─────────────────────────────────────────────────


class TestUpsertPincites:
    def test_insert(self, store_with_items):
        pincites = [
            Pincite(fn_path="mod.fn", item_key="JX46GQ9K", locator="p.14", note="test"),
        ]
        count = upsert_pincites(store_with_items, pincites)
        assert count == 1

        result = list_pincites(store_with_items, fn_path="mod.fn")
        assert len(result) == 1
        assert result[0].item_key == "JX46GQ9K"

    def test_upsert_idempotent(self, store_with_items):
        p = Pincite(fn_path="mod.fn", item_key="JX46GQ9K", locator="p.14")
        upsert_pincites(store_with_items, [p])
        upsert_pincites(store_with_items, [p])
        result = list_pincites(store_with_items, fn_path="mod.fn")
        assert len(result) == 1

    def test_skips_missing_item(self, store_with_items):
        p = Pincite(fn_path="mod.fn", item_key="ZZZZZZZZ", locator="p.1")
        count = upsert_pincites(store_with_items, [p])
        assert count == 0

    def test_tags_added(self, store_with_items):
        p = Pincite(fn_path="mod.fn", item_key="JX46GQ9K", locator="p.14")
        upsert_pincites(store_with_items, [p])
        item = store_with_items.get("JX46GQ9K")
        assert any("pin:" in t for t in item.tags)


class TestListPincites:
    def test_by_fn(self, store_with_items):
        upsert_pincites(
            store_with_items,
            [
                Pincite(fn_path="a.b", item_key="JX46GQ9K", locator="p.1"),
                Pincite(fn_path="c.d", item_key="9ASETKJ4", locator="§2"),
            ],
        )
        result = list_pincites(store_with_items, fn_path="a.b")
        assert len(result) == 1
        assert result[0].item_key == "JX46GQ9K"

    def test_by_item(self, store_with_items):
        upsert_pincites(
            store_with_items,
            [
                Pincite(fn_path="a.b", item_key="JX46GQ9K", locator="p.1"),
                Pincite(fn_path="c.d", item_key="JX46GQ9K", locator="p.2"),
            ],
        )
        result = list_pincites(store_with_items, item_key="JX46GQ9K")
        assert len(result) == 2

    def test_empty_store(self, store):
        assert list_pincites(store) == []


# ── Check keys ───────────────────────────────────────────────────────


class TestCheckKeys:
    def test_valid(self, store_with_items):
        p = Pincite(fn_path="mod.fn", item_key="JX46GQ9K")
        errors = check_pincite_keys([p], store_with_items)
        assert len(errors) == 0

    def test_invalid(self, store_with_items):
        p = Pincite(fn_path="mod.fn", item_key="NOTFOUND")
        errors = check_pincite_keys([p], store_with_items)
        assert len(errors) == 1
        assert "not found" in errors[0][1]


# ── Knowledge graph ──────────────────────────────────────────────────


class TestCitationGraph:
    def test_build(self, store_with_items):
        upsert_pincites(
            store_with_items,
            [
                Pincite(fn_path="mod.fn_a", item_key="JX46GQ9K", locator="p.1"),
                Pincite(fn_path="mod.fn_b", item_key="JX46GQ9K", locator="p.2"),
                Pincite(fn_path="mod.fn_a", item_key="9ASETKJ4", locator="§3"),
            ],
        )
        graph = build_citation_graph(store_with_items)
        assert len(graph.nodes) == 4  # 2 functions + 2 items
        assert len(graph.edges) == 3

    def test_functions_citing(self, store_with_items):
        upsert_pincites(
            store_with_items,
            [
                Pincite(fn_path="a.b", item_key="JX46GQ9K"),
                Pincite(fn_path="c.d", item_key="JX46GQ9K"),
            ],
        )
        graph = build_citation_graph(store_with_items)
        fns = graph.functions_citing("JX46GQ9K")
        assert set(fns) == {"a.b", "c.d"}

    def test_items_cited_by(self, store_with_items):
        upsert_pincites(
            store_with_items,
            [
                Pincite(fn_path="a.b", item_key="JX46GQ9K"),
                Pincite(fn_path="a.b", item_key="9ASETKJ4"),
            ],
        )
        graph = build_citation_graph(store_with_items)
        items = graph.items_cited_by("a.b")
        assert set(items) == {"JX46GQ9K", "9ASETKJ4"}

    def test_to_mermaid(self, store_with_items):
        upsert_pincites(
            store_with_items,
            [
                Pincite(fn_path="mod.fn", item_key="JX46GQ9K", locator="p.1"),
            ],
        )
        graph = build_citation_graph(store_with_items)
        mermaid = graph.to_mermaid()
        assert "graph LR" in mermaid
        assert "mod_fn" in mermaid

    def test_to_networkx_dict(self, store_with_items):
        upsert_pincites(
            store_with_items,
            [
                Pincite(fn_path="mod.fn", item_key="JX46GQ9K"),
            ],
        )
        graph = build_citation_graph(store_with_items)
        d = graph.to_networkx_dict()
        assert d["directed"] is True
        assert len(d["nodes"]) == 2
        assert len(d["links"]) == 1


# ── Format + inject ──────────────────────────────────────────────────


class TestFormatPinciteBlock:
    def test_single(self):
        p = Pincite(fn_path="m.f", item_key="JX46GQ9K", locator="p.14", note="test")
        block = format_pincite_block([p])
        assert ":pincite:`JX46GQ9K p.14` -- test" in block
        assert block.startswith("References")

    def test_no_locator(self):
        p = Pincite(fn_path="m.f", item_key="JX46GQ9K")
        block = format_pincite_block([p])
        assert ":pincite:`JX46GQ9K`" in block

    def test_empty(self):
        assert format_pincite_block([]) == ""


class TestInjectPincites:
    def test_append_to_docstring(self, tmp_path):
        source = textwrap.dedent('''
            def foo():
                """Existing docstring."""
                return 1
        ''').lstrip()
        f = tmp_path / "test_mod.py"
        f.write_text(source)

        block = "References\n~~~~~~~~~~\n:pincite:`JX46GQ9K p.14` -- test"
        result = inject_pincites_into_source(f, "foo", block, dry_run=True)
        assert result is not None
        assert ":pincite:`JX46GQ9K p.14`" in result
        assert "Existing docstring." in result

    def test_skip_no_docstring(self, tmp_path):
        source = "def foo():\n    return 1\n"
        f = tmp_path / "test_mod.py"
        f.write_text(source)
        result = inject_pincites_into_source(f, "foo", "block")
        assert result is None

    def test_skip_missing_function(self, tmp_path):
        source = "def bar():\n    pass\n"
        f = tmp_path / "test_mod.py"
        f.write_text(source)
        result = inject_pincites_into_source(f, "foo", "block")
        assert result is None

    def test_syntax_error_returns_none(self, tmp_path):
        """Lines 505, 506: inject returns None for syntax errors."""
        f = tmp_path / "bad.py"
        f.write_text("def incomplete(:")
        result = inject_pincites_into_source(f, "incomplete", "block")
        assert result is None

    def test_replace_existing_references(self, tmp_path):
        """Lines 542, 543, 545, 553, 557-559: replace existing References block."""
        source = textwrap.dedent('''
            def foo():
                """Existing docstring.

                References
                ~~~~~~~~~~
                :pincite:`AAAAAAAA p.1` -- old ref
                """
                return 1
        ''').lstrip()
        f = tmp_path / "test_mod.py"
        f.write_text(source)
        block = "References\n~~~~~~~~~~\n:pincite:`JX46GQ9K p.14` -- new ref"
        result = inject_pincites_into_source(f, "foo", block, dry_run=True)
        assert result is not None
        assert "JX46GQ9K" in result
        assert "AAAAAAAA" not in result
        assert "Existing docstring." in result

    def test_write_when_not_dry_run(self, tmp_path):
        """Lines 569, 572: inject actually writes when dry_run=False."""
        source = textwrap.dedent('''
            def foo():
                """Some docstring."""
                return 1
        ''').lstrip()
        f = tmp_path / "test_mod.py"
        f.write_text(source)
        block = "References\n~~~~~~~~~~\n:pincite:`JX46GQ9K p.14` -- test"
        result = inject_pincites_into_source(f, "foo", block, dry_run=False)
        assert result is not None
        # File should have been written
        content = f.read_text()
        assert "JX46GQ9K" in content

    def test_no_change_returns_none(self, tmp_path):
        """Line 569: if source is unchanged, returns None."""
        source = textwrap.dedent('''
            def foo():
                """References
                ~~~~~~~~~~
                :pincite:`JX46GQ9K p.14` -- test
                """
                return 1
        ''').lstrip()
        f = tmp_path / "test_mod.py"
        f.write_text(source)
        # The exact same block — may or may not change depending on indent
        block = "References\n~~~~~~~~~~\n:pincite:`JX46GQ9K p.14` -- test"
        result = inject_pincites_into_source(f, "foo", block, dry_run=True)
        # Either None (unchanged) or a string (reformatted); both acceptable
        assert result is None or isinstance(result, str)


# ── extract_all_pincites edge cases (lines 255, 260, 275) ───────────


class TestExtractAllPincitesEdge:
    def test_default_src_root(self):
        """Line 255: extract_all_pincites(None) defaults to src/."""
        from bib.pincite import extract_all_pincites

        # Just verify it doesn't crash and returns a list
        result = extract_all_pincites()
        assert isinstance(result, list)

    def test_skips_egg_info(self, tmp_path):
        """Line 260: skips .egg-info directories."""
        from bib.pincite import extract_all_pincites

        src = tmp_path / "src"
        (src / "pkg.egg-info").mkdir(parents=True)
        (src / "pkg.egg-info" / "mod.py").write_text(
            textwrap.dedent('''\
            @narwhalify
            def fn():
                """:pincite:`ABCD2345 p.1` -- ref"""
                pass
        ''')
        )
        result = extract_all_pincites(src)
        assert len(result) == 0

    def test_skips_no_docstring(self, tmp_path):
        """Line 275: narwhalify function with no docstring is skipped."""
        from bib.pincite import extract_all_pincites

        src = tmp_path / "src"
        src.mkdir()
        (src / "mod.py").write_text(
            textwrap.dedent("""\
            @narwhalify
            def fn():
                pass
        """)
        )
        result = extract_all_pincites(src)
        assert len(result) == 0


# ── build_citation_graph item lookup failure (lines 427, 428) ───────


class TestBuildCitationGraphEdge:
    def test_item_get_failure_uses_key(self, store_with_items):
        """Lines 427, 428: when store.get fails, label falls back to key."""
        from unittest.mock import patch

        from bib.pincite import build_citation_graph, upsert_pincites

        upsert_pincites(
            store_with_items,
            [Pincite(fn_path="mod.fn", item_key="JX46GQ9K", locator="p.1")],
        )
        # Patch store.get to raise KeyError for the item
        orig_get = store_with_items.get

        def failing_get(key):
            if key == "JX46GQ9K":
                raise KeyError("not found")
            return orig_get(key)

        with patch.object(store_with_items, "get", side_effect=failing_get):
            graph = build_citation_graph(store_with_items)
        # The item node should use the key as fallback label
        item_nodes = [n for n in graph.nodes if n.kind == "item"]
        assert len(item_nodes) == 1
        assert item_nodes[0].label == "JX46GQ9K"


# ── upsert_pincites tag add_tag failure (lines 338, 339) ────────────


class TestUpsertPincitesTagFailure:
    def test_tag_error_suppressed(self, store_with_items):
        """Lines 338, 339: add_tag exceptions don't prevent upsert."""
        from unittest.mock import patch

        from bib.pincite import upsert_pincites

        with patch.object(
            store_with_items, "add_tag", side_effect=Exception("tag err")
        ):
            count = upsert_pincites(
                store_with_items,
                [Pincite(fn_path="mod.fn", item_key="JX46GQ9K", locator="p.1")],
            )
        assert count == 1