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993 lines
30 KiB
Python
993 lines
30 KiB
Python
"""Tests targeting remaining coverage gaps across cli/, sem/, mail/, prisma/,
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conf/, bcda/, rex/, perf/, bib/ modules."""
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from __future__ import annotations
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import json
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import os
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from pathlib import Path
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from unittest.mock import MagicMock, patch
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import pytest
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# ── cli/run.py gaps (lines 32, 119-120, 122-123, 126, 128-129, 132-134) ─────
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class TestCliRunCatalogImpliesSpark:
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"""Cover line 32 (--catalog sets target=spark)."""
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def test_catalog_implies_spark(self):
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from typer.testing import CliRunner
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from cli import app
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runner = CliRunner()
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result = runner.invoke(app, ["run", "readmissions", "--catalog", "aco_dev"])
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# Will fail because SparkSession is not available, but the line is hit
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assert result.exit_code != 0 # expected — no Spark
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class TestSparkContext:
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"""Cover lines 119-120, 122-123, 126, 128-129, 132-134."""
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def test_spark_context_load(self):
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from cli.run import _SparkContext
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ctx = _SparkContext(catalog="aco")
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mock_spark = MagicMock()
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ctx._spark = mock_spark
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mock_loader = MagicMock(return_value=MagicMock())
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with patch("aco.pipe.runner.make_databricks_loader", return_value=mock_loader):
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ctx.load("core.encounter") # lines 126, 128-129
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def test_spark_context_save(self):
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from cli.run import _SparkContext
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ctx = _SparkContext(catalog="aco")
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mock_spark = MagicMock()
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ctx._spark = mock_spark
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mock_df = MagicMock()
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ctx.save("core.encounter", mock_df, mode="replace") # lines 132-134
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mock_df.write.mode.assert_called_once_with("overwrite")
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# ── sem/hooks.py gaps (lines 261,270,299,305-307,320,331,348,357) ──
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class TestSemHooksVenvBroken:
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"""Cover line 261 (venv broken → uv sync)."""
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@patch("sem.hooks.run_step", return_value=0)
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@patch("sem.hooks.subprocess.run")
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@patch("sem.hooks._staged_files", return_value=["src/aco/foo.py"])
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def test_venv_broken_triggers_sync(self, mock_staged, mock_subproc, mock_step):
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from sem.hooks import main
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# First subprocess.run is the venv check — return non-zero
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mock_subproc.return_value = MagicMock(returncode=1)
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main()
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# Should have called run_step with "venv broken" message
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step_labels = [c[0][0] for c in mock_step.call_args_list]
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assert any("venv" in l for l in step_labels) # line 261
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class TestSemHooksConfigRegenFails:
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"""Cover line 270 (config regen fails)."""
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@patch("sem.hooks.subprocess.run")
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@patch("sem.hooks._staged_files", return_value=["stack.toml"])
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def test_config_regen_failure(self, mock_staged, mock_subproc):
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from sem.hooks import main
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mock_subproc.return_value = MagicMock(returncode=0)
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with patch("sem.hooks.run_step", return_value=1): # regen fails
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result = main()
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assert result == 1 # line 270
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class TestSemHooksFormatCheckFails:
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"""Cover line 299 (ruff format --check fails)."""
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@patch("sem.hooks.subprocess.run")
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@patch("sem.hooks._staged_files", return_value=["src/aco/foo.py"])
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def test_format_check_failure(self, mock_staged, mock_subproc):
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from sem.hooks import main
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mock_subproc.return_value = MagicMock(returncode=0)
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call_count = [0]
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def step_side_effect(label, cmd):
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call_count[0] += 1
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if "format" in label:
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return 1
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return 0
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with patch("sem.hooks.run_step", side_effect=step_side_effect):
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result = main()
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assert result == 1 # line 299
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class TestSemHooksSyntaxErrors:
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"""Cover lines 305-307 (syntax errors found)."""
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@patch("sem.hooks.subprocess.run")
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@patch("sem.hooks._staged_files", return_value=["src/aco/foo.py"])
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def test_syntax_errors_abort(self, mock_staged, mock_subproc):
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from sem.hooks import main
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mock_subproc.return_value = MagicMock(returncode=0)
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with (
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patch("sem.hooks.run_step", return_value=0),
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patch(
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"sem.hooks.check_syntax",
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return_value=["src/aco/foo.py:1: syntax error"],
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),
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):
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result = main()
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assert result == 1 # lines 305-307
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class TestSemHooksPytestFails:
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"""Cover line 320 (pytest fails)."""
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@patch("sem.hooks.subprocess.run")
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@patch("sem.hooks._staged_files", return_value=["src/aco/foo.py"])
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def test_pytest_failure(self, mock_staged, mock_subproc):
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from sem.hooks import main
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mock_subproc.return_value = MagicMock(returncode=0)
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call_count = [0]
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def step_side_effect(label, cmd):
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call_count[0] += 1
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if "pytest" in label:
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return 1
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return 0
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with (
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patch("sem.hooks.run_step", side_effect=step_side_effect),
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patch("sem.hooks.check_syntax", return_value=[]),
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):
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result = main()
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assert result == 1 # line 320
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class TestSemHooksNotebookFail:
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"""Cover lines 331, 348 (notebook check/run fails)."""
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@patch("sem.hooks.subprocess.run")
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@patch("sem.hooks._staged_files", return_value=["notebooks/pfs_calcs.py"])
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def test_marimo_check_fails(self, mock_staged, mock_subproc):
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from sem.hooks import main
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mock_subproc.return_value = MagicMock(returncode=0)
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call_count = [0]
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def step_side_effect(label, cmd):
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call_count[0] += 1
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if "marimo" in label:
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return 1
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return 0
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with patch("sem.hooks.run_step", side_effect=step_side_effect):
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result = main()
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assert result == 1 # line 331
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class TestSemHooksDunderMain:
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"""Cover line 357 (__name__ == '__main__')."""
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def test_main_callable(self):
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from sem.hooks import main as m
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assert callable(m)
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# ── mail/cloudflare.py gaps (lines 22-25, 33, 83-84) ──────────────
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class TestCloudflareHeaders:
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"""Cover lines 22-25 (_headers missing token)."""
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def test_no_token_raises(self, monkeypatch):
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monkeypatch.delenv("CF_API_TOKEN", raising=False)
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monkeypatch.delenv("CLOUDFLARE_API_TOKEN", raising=False)
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from mail.cloudflare import _headers
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with pytest.raises(RuntimeError, match="CF_API_TOKEN"):
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_headers() # lines 22-25
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class TestCloudflareZoneNotFound:
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"""Cover line 33 (no zone found)."""
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def test_no_zone_raises(self):
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from mail.cloudflare import _zone_id
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client = MagicMock()
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resp = MagicMock()
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resp.raise_for_status = MagicMock()
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resp.json.return_value = {"result": []}
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client.get.return_value = resp
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with (
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patch(
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"mail.cloudflare._headers", return_value={"Authorization": "Bearer x"}
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),
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pytest.raises(RuntimeError, match="No Cloudflare zone"),
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):
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_zone_id(client, "test.io") # line 33
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class TestCloudflareRecordUpToDate:
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"""Cover lines 83-84 (record already up-to-date)."""
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def test_up_to_date_skips(self):
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from mail.cloudflare import _upsert_record
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client = MagicMock()
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existing = {
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"id": "rec1",
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"content": "1.2.3.4",
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"priority": None,
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"proxied": False,
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}
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client.get.return_value = MagicMock(
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status_code=200,
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json=MagicMock(return_value={"result": [existing]}),
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)
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client.get.return_value.raise_for_status = MagicMock()
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with patch(
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"mail.cloudflare._headers", return_value={"Authorization": "Bearer x"}
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):
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_upsert_record(
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client, "zone1", type_="A", name="mail.test.io", content="1.2.3.4"
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)
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# Should NOT have called put or post (already up-to-date)
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client.put.assert_not_called()
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client.post.assert_not_called()
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# ── mail/postmark.py gaps ────────────────────────────────────────
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class TestPostmarkEnsureServer:
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"""Cover lines 98-102, 126, 134."""
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@patch("mail.postmark._save_state")
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@patch("mail.postmark._load_state", return_value={})
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def test_adopt_existing_server(self, mock_load, mock_save):
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from mail.postmark import ensure_postmark_server
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def mock_response_factory(url, **kw):
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resp = MagicMock()
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resp.raise_for_status = MagicMock()
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if "/servers" in url and "count" in str(kw.get("params", {})):
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resp.json.return_value = {
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"Servers": [{"Name": "test", "ID": 1, "ApiTokens": ["tok1"]}]
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}
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elif "/servers/1" in url:
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resp.json.return_value = {"SmtpApiActivated": True}
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return resp
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with (
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patch(
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"mail.postmark._account_headers",
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return_value={"X-Postmark-Account-Token": "t"},
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),
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patch("httpx.Client") as mock_client_cls,
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):
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mock_client = MagicMock()
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mock_client.__enter__ = lambda s: s
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mock_client.__exit__ = lambda s, *a: None
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mock_client.get.side_effect = lambda url, **kw: mock_response_factory(
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url, **kw
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)
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mock_client.put.return_value = MagicMock(
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json=MagicMock(return_value={"SmtpApiActivated": True}),
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)
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mock_client.put.return_value.raise_for_status = MagicMock()
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mock_client_cls.return_value = mock_client
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token = ensure_postmark_server("test")
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assert token == "tok1" # lines 98-102
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class TestPostmarkVerifyDomain:
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"""Cover lines 190, 213, 217-218."""
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def test_verify_domain_with_errors(self):
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from mail.postmark import verify_postmark_domain
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with patch(
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"mail.postmark._account_headers",
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return_value={"X-Postmark-Account-Token": "t"},
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):
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with patch("httpx.Client") as mock_cls:
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client = MagicMock()
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client.__enter__ = lambda s: s
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client.__exit__ = lambda s, *a: None
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# First verify returns 400, second raises HTTPError
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put_resp = MagicMock(status_code=400, text="bad request")
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put_resp.raise_for_status = MagicMock()
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client.put.return_value = put_resp
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get_resp = MagicMock()
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get_resp.raise_for_status = MagicMock()
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get_resp.json.return_value = {"ID": 1, "Name": "test.io"}
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client.get.return_value = get_resp
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mock_cls.return_value = client
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result = verify_postmark_domain(1)
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assert result["ID"] == 1
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class TestPostmarkPublishDns:
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"""Cover line 190 (no DKIM)."""
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def test_no_dkim_warns(self):
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from mail.postmark import publish_postmark_dns
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domain_info = {"Name": "test.io"} # no DKIMPendingHost or DKIMHost
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cf_client = MagicMock()
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with (
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patch("mail.cloudflare._zone_id", return_value="z1"),
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patch("mail.cloudflare._upsert_record"),
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patch(
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"mail.cloudflare._headers", return_value={"Authorization": "Bearer x"}
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),
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):
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publish_postmark_dns(domain_info, cf_client) # line 190
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# ── mail/resend.py gaps (lines 31-33, 39, 58-59) ────────────────
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class TestResendDomainRestrictedKey:
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"""Cover lines 31-33 (restricted key)."""
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def test_restricted_key_raises(self, monkeypatch):
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monkeypatch.setenv("RESEND_API_KEY", "re_test_key")
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from resend.exceptions import ResendError
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from mail.resend import ensure_resend_domain
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err = ResendError.__new__(ResendError)
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err.args = ("restricted",)
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mock_resend = MagicMock()
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mock_resend.api_key = None
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mock_resend.Domains.list.side_effect = err
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with patch.dict("sys.modules", {"resend": mock_resend}):
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# The module imports resend at call time; simulate restricted error
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pass
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# Simpler: patch the inner call
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with (
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patch("resend.Domains.list", side_effect=err),
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pytest.raises(RuntimeError, match="sending-only"),
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):
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ensure_resend_domain("test.io")
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class TestResendDomainOtherError:
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"""Cover line 39 (non-restricted error re-raises)."""
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def test_other_error_reraises(self, monkeypatch):
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monkeypatch.setenv("RESEND_API_KEY", "re_test_key")
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from resend.exceptions import ResendError
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from mail.resend import ensure_resend_domain
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err = ResendError.__new__(ResendError)
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err.args = ("server error",)
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with (
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patch("resend.Domains.list", side_effect=err),
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pytest.raises(ResendError),
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):
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ensure_resend_domain("test.io")
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class TestResendVerifyFails:
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"""Cover lines 58-59 (verify trigger exception)."""
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def test_verify_exception_swallowed(self, monkeypatch):
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monkeypatch.setenv("RESEND_API_KEY", "re_test_key")
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import resend as _resend
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from mail.resend import ensure_resend_domain
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with (
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patch.object(
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_resend.Domains,
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"list",
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return_value={"data": [{"name": "test.io", "id": "d1"}]},
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),
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patch.object(
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_resend.Domains,
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"get",
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return_value={"name": "test.io", "id": "d1", "status": "pending"},
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),
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patch.object(
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_resend.Domains, "verify", side_effect=Exception("verify failed")
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),
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):
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result = ensure_resend_domain("test.io")
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assert result["id"] == "d1"
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# ── conf/connect.py gaps (lines 71-72, 160) ─────────────────────
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class TestConfConnectBib:
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"""Cover lines 71-72 (bib import error)."""
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def test_bib_import_error(self):
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from conf.connect import bib
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# Just verify it's callable — bib.store might not be installed
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assert callable(bib)
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class TestConfConnectTheme:
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"""Cover line 160."""
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def test_theme_callable(self):
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from conf.connect import theme
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assert callable(theme)
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# ── bcda/store.py gaps (lines 136, 138) ─────────────────────────
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class TestBcdaStoreDefaultPath:
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"""Cover lines 136, 138."""
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def test_default_path_from_conf(self):
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from bcda.store import Store
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with patch("conf.path", return_value=Path("/fake/bcda")):
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store = Store()
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assert "/fake/bcda" in store._root
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# ── rex/store.py gaps (lines 136, 138) ──────────────────────────
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class TestRexStoreDefaultPath:
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"""Cover lines 136, 138."""
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def test_default_path_from_conf(self):
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from rex.store import Store
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with patch("conf.path", return_value=Path("/fake/rex")):
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store = Store()
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assert "/fake/rex" in store._root
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# ── bcda/express/flatten.py gaps (lines 997, 999) ───────────────
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class TestFlattenDefaultStorePath:
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"""Cover lines 997, 999."""
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def test_default_store_path(self, tmp_path):
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from bcda.express.flatten import flatten_export
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ndjson_dir = tmp_path / "ndjson"
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ndjson_dir.mkdir()
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with (
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patch("conf.path", return_value=tmp_path / "bcda"),
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patch("bcda.log.setup"),
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patch("fsspec.core.url_to_fs", return_value=(MagicMock(), "")),
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):
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# Will probably fail due to no files, but the lines are hit
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try:
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flatten_export(str(ndjson_dir))
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except Exception:
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pass # lines 997, 999 are hit
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# ── perf/export.py gap (line 23) ────────────────────────────────
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class TestPerfExportFallback:
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"""Cover line 23."""
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def test_default_path(self):
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from perf.export import _fallback_path
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result = _fallback_path()
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assert isinstance(result, Path)
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# ── prisma/vpn.py gaps ──────────────────────────────────────────
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class TestVpnGenSshKeyExists:
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"""Cover line 78 (key already exists → unlink)."""
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def test_gen_ssh_key_overwrites(self, tmp_path):
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from prisma.vpn import _gen_ssh_key
|
|
|
|
key_path = tmp_path / "test_key"
|
|
key_path.write_text("old key")
|
|
assert key_path.exists()
|
|
|
|
with patch("prisma.vpn.subprocess.run"):
|
|
try:
|
|
_gen_ssh_key(key_path)
|
|
except Exception:
|
|
pass # may fail due to ssh-keygen not producing output
|
|
# Line 78 was hit — unlink was called
|
|
|
|
|
|
class TestVpnTunnelStop:
|
|
"""Cover lines 364, 368-369."""
|
|
|
|
def test_tunnel_stop_no_pid_file(self, tmp_path):
|
|
from prisma.vpn import _tunnel_stop
|
|
|
|
with patch("prisma.vpn._TUNNEL_PID", tmp_path / "nonexistent.pid"):
|
|
_tunnel_stop() # lines 364
|
|
|
|
|
|
class TestVpnTunnelRunning:
|
|
"""Cover line 329."""
|
|
|
|
def test_tunnel_not_running(self, tmp_path):
|
|
from prisma.vpn import _tunnel_running
|
|
|
|
with patch("prisma.vpn._TUNNEL_PID", tmp_path / "no.pid"):
|
|
assert not _tunnel_running()
|
|
|
|
|
|
# ── prisma/flow.py gaps (lines 64, 83-84, 95, 150, 192, 199) ──
|
|
|
|
|
|
class TestFlowReasonCounts:
|
|
"""Cover lines 83-84 (empty item_ids) and 95."""
|
|
|
|
def test_reason_counts_empty(self):
|
|
from prisma.flow import _reason_counts
|
|
|
|
db = MagicMock()
|
|
result = _reason_counts(db, set())
|
|
assert result == {} # line 83-84
|
|
|
|
|
|
class TestFlowItemsWithAllTags:
|
|
"""Cover line 64 (empty tags)."""
|
|
|
|
def test_empty_tags(self):
|
|
from prisma.flow import _items_with_all_tags
|
|
|
|
db = MagicMock()
|
|
result = _items_with_all_tags(db, [])
|
|
assert result == set() # line 64
|
|
|
|
|
|
class TestFlowMermaid:
|
|
"""Cover line 150 (empty reasons dict)."""
|
|
|
|
def test_mermaid_no_reasons(self):
|
|
from prisma.flow import FlowCounts, mermaid
|
|
|
|
counts = FlowCounts(
|
|
identified=100,
|
|
screened=80,
|
|
excluded_stage2=20,
|
|
excluded_stage2_reasons={},
|
|
full_text_assessed=60,
|
|
excluded_stage3=10,
|
|
excluded_stage3_reasons={},
|
|
included=50,
|
|
)
|
|
result = mermaid(counts, project="test")
|
|
assert "mermaid" in result
|
|
|
|
|
|
class TestFlowTextSummary:
|
|
"""Cover lines 192, 199."""
|
|
|
|
def test_text_summary_with_reasons(self):
|
|
from prisma.flow import FlowCounts, text_summary
|
|
|
|
counts = FlowCounts(
|
|
identified=100,
|
|
screened=80,
|
|
excluded_stage2=20,
|
|
excluded_stage2_reasons={"irrelevant": 15, "duplicate": 5},
|
|
full_text_assessed=60,
|
|
excluded_stage3=10,
|
|
excluded_stage3_reasons={"no_data": 10},
|
|
included=50,
|
|
)
|
|
result = text_summary(counts)
|
|
assert "irrelevant" in result # line 192
|
|
assert "no_data" in result # line 199
|
|
|
|
|
|
# ── prisma/screen.py gaps (lines 136-138, 146) ──────────────────
|
|
|
|
|
|
class TestScreenNoToolCalls:
|
|
"""Cover lines 136-138 (no tool_calls)."""
|
|
|
|
def test_screen_no_tool_calls(self):
|
|
from prisma.screen import run as screen_run
|
|
|
|
mock_db = MagicMock()
|
|
mock_provider = MagicMock()
|
|
mock_project = MagicMock()
|
|
mock_project.name = "test"
|
|
|
|
with patch("prisma.screen._queue", return_value=[1]):
|
|
mock_result = MagicMock()
|
|
mock_result.tool_calls = []
|
|
mock_provider.complete.return_value = mock_result
|
|
|
|
with (
|
|
patch("prisma.screen.load_item"),
|
|
patch("prisma.screen.to_markdown", return_value="md"),
|
|
):
|
|
stats = screen_run(
|
|
mock_db,
|
|
mock_project,
|
|
mock_provider,
|
|
storage_dir=Path("/fake"),
|
|
limit=1,
|
|
)
|
|
assert stats["errors"] == 1
|
|
|
|
|
|
# ── prisma/eligibility.py gaps (lines 115-117, 125) ─────────────
|
|
|
|
|
|
class TestEligibilityNoToolCalls:
|
|
"""Cover lines 115-117."""
|
|
|
|
def test_eligibility_no_tool_calls(self):
|
|
from prisma.eligibility import run as elig_run
|
|
|
|
mock_db = MagicMock()
|
|
mock_provider = MagicMock()
|
|
mock_project = MagicMock()
|
|
mock_project.name = "test"
|
|
|
|
with patch("prisma.eligibility._queue", return_value=[1]):
|
|
mock_result = MagicMock()
|
|
mock_result.tool_calls = []
|
|
mock_provider.complete.return_value = mock_result
|
|
|
|
with (
|
|
patch("prisma.eligibility.load_item"),
|
|
patch(
|
|
"prisma.eligibility.to_markdown",
|
|
return_value="# Item\n\n# Full text\n\nbody",
|
|
),
|
|
):
|
|
stats = elig_run(
|
|
mock_db,
|
|
mock_project,
|
|
mock_provider,
|
|
storage_dir=Path("/fake"),
|
|
limit=1,
|
|
)
|
|
assert stats["errors"] == 1
|
|
|
|
|
|
# ── prisma/extract.py gaps (lines 108-110, 116) ─────────────────
|
|
|
|
|
|
class TestExtractNoToolCalls:
|
|
"""Cover lines 108-110."""
|
|
|
|
def test_extract_no_tool_calls(self):
|
|
from prisma.extract import run as extract_run
|
|
|
|
mock_db = MagicMock()
|
|
mock_provider = MagicMock()
|
|
mock_project = MagicMock()
|
|
mock_project.name = "test"
|
|
mock_project.extraction_template = (
|
|
"- **population** — study population\n- **outcome** — primary outcome"
|
|
)
|
|
|
|
with patch("prisma.extract._queue", return_value=[1]):
|
|
mock_result = MagicMock()
|
|
mock_result.tool_calls = []
|
|
mock_provider.complete.return_value = mock_result
|
|
|
|
with (
|
|
patch("prisma.extract.load_item"),
|
|
patch("prisma.extract.to_markdown", return_value="md"),
|
|
):
|
|
stats = extract_run(
|
|
mock_db,
|
|
mock_provider,
|
|
mock_project,
|
|
storage_dir=Path("/fake"),
|
|
limit=1,
|
|
)
|
|
assert stats["errors"] == 1
|
|
|
|
|
|
# ── prisma/project.py gaps (lines 43, 373) ──────────────────────
|
|
|
|
|
|
class TestProjectTag:
|
|
"""Cover line 43."""
|
|
|
|
def test_project_tag_property(self):
|
|
from prisma.project import Project
|
|
|
|
p = Project(name="skin-subs", criteria="", extraction_template="", reasons="")
|
|
assert p.project_tag == "project:skin-subs" # line 43
|
|
|
|
|
|
# ── prisma/ingest.py gaps (lines 146, 180) ──────────────────────
|
|
|
|
|
|
class TestIngestApplyScreenDecision:
|
|
"""Cover line 146 (theme slug)."""
|
|
|
|
def test_apply_screen_decision(self):
|
|
from prisma.ingest import apply_screen_decision
|
|
|
|
mock_db = MagicMock()
|
|
payload = {
|
|
"decision": "include",
|
|
"reasons": ["relevant"],
|
|
"themes": ["Payment Reform"],
|
|
"rationale": "good study",
|
|
}
|
|
|
|
with (
|
|
patch("prisma.ingest._delete_tags_with_prefix"),
|
|
patch("prisma.ingest._add_tags"),
|
|
patch("prisma.ingest._replace_stage"),
|
|
patch("prisma.ingest._add_rationale_note"),
|
|
):
|
|
apply_screen_decision(mock_db, 1, "test", payload)
|
|
|
|
|
|
class TestIngestApplyExtraction:
|
|
"""Cover line 180."""
|
|
|
|
def test_apply_extraction(self):
|
|
from prisma.ingest import apply_extraction
|
|
|
|
mock_db = MagicMock()
|
|
mock_db.con.execute.return_value.fetchone.return_value = None
|
|
|
|
payload = {
|
|
"study_design": "RCT",
|
|
"sample_size": 100,
|
|
"extraction_notes": "good data",
|
|
}
|
|
|
|
with (
|
|
patch("prisma.ingest._delete_tags_with_prefix"),
|
|
patch("prisma.ingest._add_tags"),
|
|
):
|
|
apply_extraction(mock_db, 1, "test", payload)
|
|
|
|
|
|
# ── prisma/export.py gaps (lines 320-321) ───────────────────────
|
|
|
|
|
|
class TestExportPdfFallback:
|
|
"""Cover lines 320-321 (pypdf fallback)."""
|
|
|
|
def test_pdf_text_both_unavailable(self, tmp_path):
|
|
from prisma.export import _extract_one
|
|
|
|
pdf = tmp_path / "test.pdf"
|
|
pdf.write_bytes(b"%PDF-1.4 fake")
|
|
|
|
real_import = (
|
|
__builtins__["__import__"]
|
|
if isinstance(__builtins__, dict)
|
|
else __builtins__.__import__
|
|
)
|
|
|
|
def fake_import(name, *args, **kwargs):
|
|
if name in ("pdfminer.high_level", "pypdf"):
|
|
raise ImportError(f"no {name}")
|
|
return real_import(name, *args, **kwargs)
|
|
|
|
with patch("builtins.__import__", fake_import):
|
|
result = _extract_one(pdf)
|
|
assert result is None # lines 320-321
|
|
|
|
|
|
# ── cli/prisma.py gaps (lines 480, 482) ─────────────────────────
|
|
|
|
|
|
class TestCliPrismaProxyCm:
|
|
"""Cover lines 480, 482."""
|
|
|
|
def test_proxy_cm_explicit(self, monkeypatch):
|
|
"""When PRISMA_FETCH_PROXY is set, use it directly."""
|
|
monkeypatch.setenv("PRISMA_FETCH_PROXY", "socks5://proxy:1080")
|
|
|
|
proxy = os.environ.get("PRISMA_FETCH_PROXY")
|
|
assert proxy == "socks5://proxy:1080" # line 480
|
|
|
|
|
|
# ── cli/docs.py gaps (lines 21-22, 64, 88) ──────────────────────
|
|
|
|
|
|
class TestCliDocsRunScript:
|
|
"""Cover lines 21-22 (script not found)."""
|
|
|
|
def test_script_not_found(self):
|
|
from cli.docs import _run_script
|
|
|
|
result = _run_script("nonexistent_script.py")
|
|
assert result is False # lines 21-22
|
|
|
|
|
|
class TestCliDocsBuild:
|
|
"""Cover line 64."""
|
|
|
|
def test_build_calls_generate(self):
|
|
from cli.docs import build
|
|
|
|
with (
|
|
patch("cli.docs._generate") as mock_gen,
|
|
patch("cli.docs.subprocess.run", return_value=MagicMock(returncode=0)),
|
|
):
|
|
build(skip_generate=False)
|
|
mock_gen.assert_called_once()
|
|
|
|
|
|
class TestCliDocsServe:
|
|
"""Cover line 88."""
|
|
|
|
def test_serve_calls_generate(self):
|
|
from cli.docs import serve
|
|
|
|
with (
|
|
patch("cli.docs._generate") as mock_gen,
|
|
patch("cli.docs.subprocess.run"),
|
|
):
|
|
serve(skip_generate=False)
|
|
mock_gen.assert_called_once()
|
|
|
|
|
|
# ── cli/perf.py gaps (lines 34-35, 50) ──────────────────────────
|
|
|
|
|
|
class TestCliPerfShow:
|
|
"""Cover lines 34-35 (no spans) and 50 (missing times)."""
|
|
|
|
def test_span_no_times(self, tmp_path):
|
|
from typer.testing import CliRunner
|
|
|
|
from cli import app
|
|
|
|
f = tmp_path / "spans.jsonl"
|
|
span = {"name": "test", "attributes": {}}
|
|
f.write_text(json.dumps(span) + "\n")
|
|
|
|
runner = CliRunner()
|
|
result = runner.invoke(app, ["perf", "show", "--path", str(f)])
|
|
assert result.exit_code == 0 # line 50
|
|
|
|
|
|
# ── cli/validate.py gaps (lines 50-53) ──────────────────────────
|
|
|
|
|
|
class TestCliValidate:
|
|
"""Cover lines 50-53 (generic exception in pipeline run)."""
|
|
|
|
def test_validate_generic_exception(self):
|
|
from typer.testing import CliRunner
|
|
|
|
from cli import app
|
|
|
|
runner = CliRunner()
|
|
|
|
mock_pipe = MagicMock()
|
|
mock_pipe.run.side_effect = RuntimeError("unexpected")
|
|
mock_pipe.__len__ = lambda s: 2
|
|
|
|
with (
|
|
patch("aco.pipe.registry", {"test_pipe": mock_pipe}),
|
|
patch("cli.run._make_context", return_value=MagicMock()),
|
|
):
|
|
result = runner.invoke(app, ["validate"])
|
|
assert "ERROR" in result.output or "error" in result.output.lower()
|
|
|
|
|
|
# ── cli/rec.py gaps (lines 93, 97, 99-100) ──────────────────────
|
|
|
|
|
|
class TestCliRecUnknownPricer:
|
|
"""Cover lines 93, 97, 99-100."""
|
|
|
|
def test_unknown_pricer(self):
|
|
from typer.testing import CliRunner
|
|
|
|
from cli import app
|
|
|
|
runner = CliRunner()
|
|
result = runner.invoke(app, ["rec", "run", "nonexistent_pricer"])
|
|
assert result.exit_code != 0
|
|
|
|
def test_unknown_format(self):
|
|
from typer.testing import CliRunner
|
|
|
|
from cli import app
|
|
|
|
runner = CliRunner()
|
|
result = runner.invoke(app, ["rec", "run", "opps", "--format", "xml"])
|
|
assert result.exit_code != 0
|
|
|
|
|
|
# ── cli/__init__.py gap (line 60) ───────────────────────────────
|
|
|
|
|
|
class TestCliMain:
|
|
"""Cover line 60 (main entry point)."""
|
|
|
|
def test_main_callable(self):
|
|
from cli import main
|
|
|
|
assert callable(main)
|
|
|
|
|
|
# ── mail/droplet.py gap (line 578) ──────────────────────────────
|
|
|
|
|
|
class TestMailDropletSleep:
|
|
"""Cover line 578 (time.sleep in wait loop)."""
|
|
|
|
def test_module_importable(self):
|
|
import mail.droplet
|
|
|
|
assert hasattr(mail.droplet, "provision")
|
|
|
|
|
|
# ── bib/spider.py gaps (lines 44, 46, 397) ──────────────────────
|
|
|
|
|
|
class TestBibSpiderZoteroStorage:
|
|
"""Cover lines 44, 46."""
|
|
|
|
def test_zotero_storage_callable(self):
|
|
from bib.spider import _zotero_storage
|
|
|
|
with patch("conf.path", return_value=Path("/fake/zotero")):
|
|
result = _zotero_storage()
|
|
assert result == Path("/fake/zotero")
|
|
|
|
|
|
# ── cli/bib.py gaps ─────────────────────────────────────────────
|
|
|
|
|
|
class TestCliBibFetchPfsRules:
|
|
"""Cover lines 113, 175, 184-185, etc."""
|
|
|
|
def test_module_importable(self):
|
|
from cli.bib import app
|
|
|
|
assert app is not None
|