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chore: clean sweep — lint, format, stale refs, generated artifacts
- Fix all 72 ruff lint errors (unused imports, unused variables, E402)
- Format all 14 unformatted dev/scripts files
- Move generated artifacts to assets/ (dag.html, pfs.html)
- Remove duplicate root coverage.svg (already in assets/icons/)
- Update .dockerignore for infra/ tree layout
- Update .gitignore: add .env.bak, mirrors/, htmlcov/
- Fix stale path refs in coverage_badge.py, woodpecker backend,
  test_network_isolation.sh, docs custom.css
- Add .gitkeep to empty dirs (infra/polaris, cloud/*/terraform)
- Delete 12 stale local branches, 10 stale remote branches
2026-03-24 17:33:55 -04:00

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# Virtual environment
.venv/
# Data directories (user data, not tracked)
data/
zotero/data/
zotero/profiles/
tuva/
logs/**
# Generated DAB SQL (regenerate via gen_config.py --dab-sql)
bundle/sql/
# Marimo cache
notebooks/__marimo__/
# Secrets and keys
.deploy_key
.deploy_key.pub
.env
.env.bak
# Python build artifacts
__pycache__/
*.pyc
.coverage
dist/
*.egg-info/
htmlcov/
# IDE / tool settings
.claude/settings.local.json
notebooks/aco.duckdb
# Package mirrors (local cache, not tracked)
mirrors/
# Docs (auto-generated at build time)
docs/docs/api/
docs/static/library.json
docs/node_modules/
docs/build/
docs/.docusaurus/