diff --git a/docs/docs/cli/api-serve.md b/docs/docs/cli/api-serve.md index 78fccfa..6bc5db2 100644 --- a/docs/docs/cli/api-serve.md +++ b/docs/docs/cli/api-serve.md @@ -1,6 +1,6 @@ --- title: stack api serve -sidebar_position: 62 +sidebar_position: 63 --- # `stack api serve` diff --git a/docs/docs/cli/api.md b/docs/docs/cli/api.md index acf8249..3c8cbbe 100644 --- a/docs/docs/cli/api.md +++ b/docs/docs/cli/api.md @@ -1,6 +1,6 @@ --- title: stack api -sidebar_position: 61 +sidebar_position: 62 --- # `stack api` diff --git a/docs/docs/cli/db-comment.md b/docs/docs/cli/db-comment.md index c0f7f9c..b3364a1 100644 --- a/docs/docs/cli/db-comment.md +++ b/docs/docs/cli/db-comment.md @@ -1,6 +1,6 @@ --- title: stack db comment -sidebar_position: 55 +sidebar_position: 56 --- # `stack db comment` diff --git a/docs/docs/cli/db-inspect.md b/docs/docs/cli/db-inspect.md index 29ae60d..78db95e 100644 --- a/docs/docs/cli/db-inspect.md +++ b/docs/docs/cli/db-inspect.md @@ -1,6 +1,6 @@ --- title: stack db inspect -sidebar_position: 56 +sidebar_position: 57 --- # `stack db inspect` diff --git a/docs/docs/cli/db.md b/docs/docs/cli/db.md index 8c73d5b..529cd59 100644 --- a/docs/docs/cli/db.md +++ b/docs/docs/cli/db.md @@ -1,6 +1,6 @@ --- title: stack db -sidebar_position: 54 +sidebar_position: 55 --- # `stack db` diff --git a/docs/docs/cli/docs-build.md b/docs/docs/cli/docs-build.md index e243395..d37c434 100644 --- a/docs/docs/cli/docs-build.md +++ b/docs/docs/cli/docs-build.md @@ -1,6 +1,6 @@ --- title: stack docs build -sidebar_position: 58 +sidebar_position: 59 --- # `stack docs build` diff --git a/docs/docs/cli/docs-generate.md b/docs/docs/cli/docs-generate.md index 6b0b71f..e37d9dd 100644 --- a/docs/docs/cli/docs-generate.md +++ b/docs/docs/cli/docs-generate.md @@ -1,6 +1,6 @@ --- title: stack docs generate -sidebar_position: 60 +sidebar_position: 61 --- # `stack docs generate` diff --git a/docs/docs/cli/docs-serve.md b/docs/docs/cli/docs-serve.md index b0649b3..76a6fd1 100644 --- a/docs/docs/cli/docs-serve.md +++ b/docs/docs/cli/docs-serve.md @@ -1,6 +1,6 @@ --- title: stack docs serve -sidebar_position: 59 +sidebar_position: 60 --- # `stack docs serve` diff --git a/docs/docs/cli/docs.md b/docs/docs/cli/docs.md index 2067ef6..09edd1b 100644 --- a/docs/docs/cli/docs.md +++ b/docs/docs/cli/docs.md @@ -1,6 +1,6 @@ --- title: stack docs -sidebar_position: 57 +sidebar_position: 58 --- # `stack docs` diff --git a/docs/docs/cli/llm-tag.md b/docs/docs/cli/llm-tag.md new file mode 100644 index 0000000..e08c067 --- /dev/null +++ b/docs/docs/cli/llm-tag.md @@ -0,0 +1,38 @@ +--- +title: stack llm tag +sidebar_position: 54 +--- + +# `stack llm tag` + +``` +Usage: stack llm tag [OPTIONS] + + Closed-vocabulary theme tagging of one docket's comments (P35): shortlist by + similarity to the theme cards, judge each candidate yes/no on the largest live + host with the scoring chunk as evidence, record state in the item's + extra_json, and replace its llm: tags. Resumable — unchanged comments are + skipped unless --force. + +╭─ Options ────────────────────────────────────────────────────────────────────╮ +│ * --docket TEXT regulations.gov docket id, e.g. │ +│ CMS-2026-2377. │ +│ [required] │ +│ --limit INTEGER Stop after N comments (newest first; 0 = │ +│ all). │ +│ [default: 0] │ +│ --force Re-tag comments whose stored state is │ +│ current. │ +│ --dry-run Compute and print, write nothing. │ +│ --top INTEGER Themes shortlisted per comment before │ +│ judging. │ +│ [default: 8] │ +│ --max-tags INTEGER Most themes written per comment. │ +│ [default: 4] │ +│ --min-confidence FLOAT Shortlist similarity below which a │ +│ judged yes is not written. │ +│ [default: 0.0] │ +│ --verbose Print every comment's tags. │ +│ --help Show this message and exit. │ +╰──────────────────────────────────────────────────────────────────────────────╯ +``` diff --git a/docs/docs/cli/llm.md b/docs/docs/cli/llm.md index 4128367..a04923d 100644 --- a/docs/docs/cli/llm.md +++ b/docs/docs/cli/llm.md @@ -23,5 +23,10 @@ Usage: stack llm [OPTIONS] COMMAND [ARGS]... │ and list its slugs, or show one theme's definition, synonyms and │ │ the FR │ │ section stems it was seeded from. │ +│ tag Closed-vocabulary theme tagging of one docket's comments (P35): │ +│ shortlist by similarity to the theme cards, judge each candidate │ +│ yes/no on the largest live host with the scoring chunk as evidence, │ +│ record state in the item's extra_json, and replace its llm: tags. │ +│ Resumable — unchanged comments are skipped unless --force. │ ╰──────────────────────────────────────────────────────────────────────────────╯ ``` diff --git a/docs/docs/cli/mail-attach-smarthost.md b/docs/docs/cli/mail-attach-smarthost.md index f2b38f0..7758fbd 100644 --- a/docs/docs/cli/mail-attach-smarthost.md +++ b/docs/docs/cli/mail-attach-smarthost.md @@ -1,6 +1,6 @@ --- title: stack mail attach-smarthost -sidebar_position: 103 +sidebar_position: 104 --- # `stack mail attach-smarthost` diff --git a/docs/docs/cli/mail-dkim-export.md b/docs/docs/cli/mail-dkim-export.md index a97e00b..9c67c22 100644 --- a/docs/docs/cli/mail-dkim-export.md +++ b/docs/docs/cli/mail-dkim-export.md @@ -1,6 +1,6 @@ --- title: stack mail dkim-export -sidebar_position: 102 +sidebar_position: 103 --- # `stack mail dkim-export` diff --git a/docs/docs/cli/mail-dns.md b/docs/docs/cli/mail-dns.md index 595e177..e1730e5 100644 --- a/docs/docs/cli/mail-dns.md +++ b/docs/docs/cli/mail-dns.md @@ -1,6 +1,6 @@ --- title: stack mail dns -sidebar_position: 101 +sidebar_position: 102 --- # `stack mail dns` diff --git a/docs/docs/cli/mail-down.md b/docs/docs/cli/mail-down.md index e23a231..2deb87e 100644 --- a/docs/docs/cli/mail-down.md +++ b/docs/docs/cli/mail-down.md @@ -1,6 +1,6 @@ --- title: stack mail down -sidebar_position: 99 +sidebar_position: 100 --- # `stack mail down` diff --git a/docs/docs/cli/mail-provision.md b/docs/docs/cli/mail-provision.md index cceec5d..f6fe5b0 100644 --- a/docs/docs/cli/mail-provision.md +++ b/docs/docs/cli/mail-provision.md @@ -1,6 +1,6 @@ --- title: stack mail provision -sidebar_position: 97 +sidebar_position: 98 --- # `stack mail provision` diff --git a/docs/docs/cli/mail-rotate-creds.md b/docs/docs/cli/mail-rotate-creds.md index 0d98cd4..1f80c5f 100644 --- a/docs/docs/cli/mail-rotate-creds.md +++ b/docs/docs/cli/mail-rotate-creds.md @@ -1,6 +1,6 @@ --- title: stack mail rotate-creds -sidebar_position: 104 +sidebar_position: 105 --- # `stack mail rotate-creds` diff --git a/docs/docs/cli/mail-seed-mailboxes.md b/docs/docs/cli/mail-seed-mailboxes.md index ffe2741..3dada3d 100644 --- a/docs/docs/cli/mail-seed-mailboxes.md +++ b/docs/docs/cli/mail-seed-mailboxes.md @@ -1,6 +1,6 @@ --- title: stack mail seed-mailboxes -sidebar_position: 105 +sidebar_position: 106 --- # `stack mail seed-mailboxes` diff --git a/docs/docs/cli/mail-status.md b/docs/docs/cli/mail-status.md index b0a565a..9ed0514 100644 --- a/docs/docs/cli/mail-status.md +++ b/docs/docs/cli/mail-status.md @@ -1,6 +1,6 @@ --- title: stack mail status -sidebar_position: 100 +sidebar_position: 101 --- # `stack mail status` diff --git a/docs/docs/cli/mail-up.md b/docs/docs/cli/mail-up.md index 1bda771..c39cb51 100644 --- a/docs/docs/cli/mail-up.md +++ b/docs/docs/cli/mail-up.md @@ -1,6 +1,6 @@ --- title: stack mail up -sidebar_position: 98 +sidebar_position: 99 --- # `stack mail up` diff --git a/docs/docs/cli/mail-wire-git.md b/docs/docs/cli/mail-wire-git.md index 21a087e..df87669 100644 --- a/docs/docs/cli/mail-wire-git.md +++ b/docs/docs/cli/mail-wire-git.md @@ -1,6 +1,6 @@ --- title: stack mail wire-git -sidebar_position: 106 +sidebar_position: 107 --- # `stack mail wire-git` diff --git a/docs/docs/cli/mail.md b/docs/docs/cli/mail.md index 99f002e..b7ef94b 100644 --- a/docs/docs/cli/mail.md +++ b/docs/docs/cli/mail.md @@ -1,6 +1,6 @@ --- title: stack mail -sidebar_position: 96 +sidebar_position: 97 --- # `stack mail` diff --git a/docs/docs/cli/perf-show.md b/docs/docs/cli/perf-show.md index 7f0bec3..f1e0c71 100644 --- a/docs/docs/cli/perf-show.md +++ b/docs/docs/cli/perf-show.md @@ -1,6 +1,6 @@ --- title: stack perf show -sidebar_position: 64 +sidebar_position: 65 --- # `stack perf show` diff --git a/docs/docs/cli/perf.md b/docs/docs/cli/perf.md index a07728d..04402e7 100644 --- a/docs/docs/cli/perf.md +++ b/docs/docs/cli/perf.md @@ -1,6 +1,6 @@ --- title: stack perf -sidebar_position: 63 +sidebar_position: 64 --- # `stack perf` diff --git a/docs/docs/cli/pfs-cpt-ingest.md b/docs/docs/cli/pfs-cpt-ingest.md index b4d6a02..c3cbd82 100644 --- a/docs/docs/cli/pfs-cpt-ingest.md +++ b/docs/docs/cli/pfs-cpt-ingest.md @@ -1,6 +1,6 @@ --- title: stack pfs cpt-ingest -sidebar_position: 78 +sidebar_position: 79 --- # `stack pfs cpt-ingest` diff --git a/docs/docs/cli/pfs-elements.md b/docs/docs/cli/pfs-elements.md index cffc9c9..b30a493 100644 --- a/docs/docs/cli/pfs-elements.md +++ b/docs/docs/cli/pfs-elements.md @@ -1,6 +1,6 @@ --- title: stack pfs elements -sidebar_position: 70 +sidebar_position: 71 --- # `stack pfs elements` diff --git a/docs/docs/cli/pfs-exposure.md b/docs/docs/cli/pfs-exposure.md index 3b443d3..32c8775 100644 --- a/docs/docs/cli/pfs-exposure.md +++ b/docs/docs/cli/pfs-exposure.md @@ -1,6 +1,6 @@ --- title: stack pfs exposure -sidebar_position: 75 +sidebar_position: 76 --- # `stack pfs exposure` diff --git a/docs/docs/cli/pfs-families.md b/docs/docs/cli/pfs-families.md index 87c34cd..f120337 100644 --- a/docs/docs/cli/pfs-families.md +++ b/docs/docs/cli/pfs-families.md @@ -1,6 +1,6 @@ --- title: stack pfs families -sidebar_position: 72 +sidebar_position: 73 --- # `stack pfs families` diff --git a/docs/docs/cli/pfs-guidance.md b/docs/docs/cli/pfs-guidance.md index e5837e5..8f4ff52 100644 --- a/docs/docs/cli/pfs-guidance.md +++ b/docs/docs/cli/pfs-guidance.md @@ -1,6 +1,6 @@ --- title: stack pfs guidance -sidebar_position: 73 +sidebar_position: 74 --- # `stack pfs guidance` diff --git a/docs/docs/cli/pfs-lineage.md b/docs/docs/cli/pfs-lineage.md index a12df77..6dcc13c 100644 --- a/docs/docs/cli/pfs-lineage.md +++ b/docs/docs/cli/pfs-lineage.md @@ -1,6 +1,6 @@ --- title: stack pfs lineage -sidebar_position: 71 +sidebar_position: 72 --- # `stack pfs lineage` diff --git a/docs/docs/cli/pfs-reaction.md b/docs/docs/cli/pfs-reaction.md index ebd436a..529be24 100644 --- a/docs/docs/cli/pfs-reaction.md +++ b/docs/docs/cli/pfs-reaction.md @@ -1,6 +1,6 @@ --- title: stack pfs reaction -sidebar_position: 74 +sidebar_position: 75 --- # `stack pfs reaction` diff --git a/docs/docs/cli/pfs-review.md b/docs/docs/cli/pfs-review.md index e8836a8..0bf7a12 100644 --- a/docs/docs/cli/pfs-review.md +++ b/docs/docs/cli/pfs-review.md @@ -1,6 +1,6 @@ --- title: stack pfs review -sidebar_position: 77 +sidebar_position: 78 --- # `stack pfs review` diff --git a/docs/docs/cli/pfs-utilization.md b/docs/docs/cli/pfs-utilization.md index 9c2a8d9..f98974b 100644 --- a/docs/docs/cli/pfs-utilization.md +++ b/docs/docs/cli/pfs-utilization.md @@ -1,6 +1,6 @@ --- title: stack pfs utilization -sidebar_position: 76 +sidebar_position: 77 --- # `stack pfs utilization` diff --git a/docs/docs/cli/pfs.md b/docs/docs/cli/pfs.md index 7578636..7fb6804 100644 --- a/docs/docs/cli/pfs.md +++ b/docs/docs/cli/pfs.md @@ -1,6 +1,6 @@ --- title: stack pfs -sidebar_position: 69 +sidebar_position: 70 --- # `stack pfs` diff --git a/docs/docs/cli/prisma-eligible.md b/docs/docs/cli/prisma-eligible.md index 08610fb..62fff2e 100644 --- a/docs/docs/cli/prisma-eligible.md +++ b/docs/docs/cli/prisma-eligible.md @@ -1,6 +1,6 @@ --- title: stack prisma eligible -sidebar_position: 90 +sidebar_position: 91 --- # `stack prisma eligible` diff --git a/docs/docs/cli/prisma-export.md b/docs/docs/cli/prisma-export.md index 26a5bcc..849b725 100644 --- a/docs/docs/cli/prisma-export.md +++ b/docs/docs/cli/prisma-export.md @@ -1,6 +1,6 @@ --- title: stack prisma export -sidebar_position: 87 +sidebar_position: 88 --- # `stack prisma export` diff --git a/docs/docs/cli/prisma-extract.md b/docs/docs/cli/prisma-extract.md index 08cbf09..fe02a9b 100644 --- a/docs/docs/cli/prisma-extract.md +++ b/docs/docs/cli/prisma-extract.md @@ -1,6 +1,6 @@ --- title: stack prisma extract -sidebar_position: 91 +sidebar_position: 92 --- # `stack prisma extract` diff --git a/docs/docs/cli/prisma-fetch.md b/docs/docs/cli/prisma-fetch.md index 33bf0eb..8c7ceda 100644 --- a/docs/docs/cli/prisma-fetch.md +++ b/docs/docs/cli/prisma-fetch.md @@ -1,6 +1,6 @@ --- title: stack prisma fetch -sidebar_position: 93 +sidebar_position: 94 --- # `stack prisma fetch` diff --git a/docs/docs/cli/prisma-flow.md b/docs/docs/cli/prisma-flow.md index 44a0781..97a7eab 100644 --- a/docs/docs/cli/prisma-flow.md +++ b/docs/docs/cli/prisma-flow.md @@ -1,6 +1,6 @@ --- title: stack prisma flow -sidebar_position: 92 +sidebar_position: 93 --- # `stack prisma flow` diff --git a/docs/docs/cli/prisma-init.md b/docs/docs/cli/prisma-init.md index f93b2fb..6ed98a4 100644 --- a/docs/docs/cli/prisma-init.md +++ b/docs/docs/cli/prisma-init.md @@ -1,6 +1,6 @@ --- title: stack prisma init -sidebar_position: 86 +sidebar_position: 87 --- # `stack prisma init` diff --git a/docs/docs/cli/prisma-ping-llm.md b/docs/docs/cli/prisma-ping-llm.md index 9d161f3..195b9ad 100644 --- a/docs/docs/cli/prisma-ping-llm.md +++ b/docs/docs/cli/prisma-ping-llm.md @@ -1,6 +1,6 @@ --- title: stack prisma ping-llm -sidebar_position: 88 +sidebar_position: 89 --- # `stack prisma ping-llm` diff --git a/docs/docs/cli/prisma-run.md b/docs/docs/cli/prisma-run.md index 404bd45..00db0a0 100644 --- a/docs/docs/cli/prisma-run.md +++ b/docs/docs/cli/prisma-run.md @@ -1,6 +1,6 @@ --- title: stack prisma run -sidebar_position: 94 +sidebar_position: 95 --- # `stack prisma run` diff --git a/docs/docs/cli/prisma-screen.md b/docs/docs/cli/prisma-screen.md index 152cc1d..a0e9da0 100644 --- a/docs/docs/cli/prisma-screen.md +++ b/docs/docs/cli/prisma-screen.md @@ -1,6 +1,6 @@ --- title: stack prisma screen -sidebar_position: 89 +sidebar_position: 90 --- # `stack prisma screen` diff --git a/docs/docs/cli/prisma-vpn.md b/docs/docs/cli/prisma-vpn.md index 6b63da7..d9f9625 100644 --- a/docs/docs/cli/prisma-vpn.md +++ b/docs/docs/cli/prisma-vpn.md @@ -1,6 +1,6 @@ --- title: stack prisma vpn -sidebar_position: 95 +sidebar_position: 96 --- # `stack prisma vpn` diff --git a/docs/docs/cli/prisma.md b/docs/docs/cli/prisma.md index 42d5a5e..457471a 100644 --- a/docs/docs/cli/prisma.md +++ b/docs/docs/cli/prisma.md @@ -1,6 +1,6 @@ --- title: stack prisma -sidebar_position: 85 +sidebar_position: 86 --- # `stack prisma` diff --git a/docs/docs/cli/rec-list.md b/docs/docs/cli/rec-list.md index 455d9f4..313cf27 100644 --- a/docs/docs/cli/rec-list.md +++ b/docs/docs/cli/rec-list.md @@ -1,6 +1,6 @@ --- title: stack rec list -sidebar_position: 66 +sidebar_position: 67 --- # `stack rec list` diff --git a/docs/docs/cli/rec-opps.md b/docs/docs/cli/rec-opps.md index 073871c..da62a2c 100644 --- a/docs/docs/cli/rec-opps.md +++ b/docs/docs/cli/rec-opps.md @@ -1,6 +1,6 @@ --- title: stack rec opps -sidebar_position: 68 +sidebar_position: 69 --- # `stack rec opps` diff --git a/docs/docs/cli/rec-pfs.md b/docs/docs/cli/rec-pfs.md index f2d5ec9..3ba7b6f 100644 --- a/docs/docs/cli/rec-pfs.md +++ b/docs/docs/cli/rec-pfs.md @@ -1,6 +1,6 @@ --- title: stack rec pfs -sidebar_position: 67 +sidebar_position: 68 --- # `stack rec pfs` diff --git a/docs/docs/cli/rec.md b/docs/docs/cli/rec.md index 9efb9db..14ae46c 100644 --- a/docs/docs/cli/rec.md +++ b/docs/docs/cli/rec.md @@ -1,6 +1,6 @@ --- title: stack rec -sidebar_position: 65 +sidebar_position: 66 --- # `stack rec` diff --git a/docs/docs/cli/zot-dump-schema.md b/docs/docs/cli/zot-dump-schema.md index cc95b01..af6928d 100644 --- a/docs/docs/cli/zot-dump-schema.md +++ b/docs/docs/cli/zot-dump-schema.md @@ -1,6 +1,6 @@ --- title: stack zot dump-schema -sidebar_position: 80 +sidebar_position: 81 --- # `stack zot dump-schema` diff --git a/docs/docs/cli/zot-fix-dates.md b/docs/docs/cli/zot-fix-dates.md index 545efe9..5211d99 100644 --- a/docs/docs/cli/zot-fix-dates.md +++ b/docs/docs/cli/zot-fix-dates.md @@ -1,6 +1,6 @@ --- title: stack zot fix-dates -sidebar_position: 81 +sidebar_position: 82 --- # `stack zot fix-dates` diff --git a/docs/docs/cli/zot-fix-fields.md b/docs/docs/cli/zot-fix-fields.md index aba4715..396cef0 100644 --- a/docs/docs/cli/zot-fix-fields.md +++ b/docs/docs/cli/zot-fix-fields.md @@ -1,6 +1,6 @@ --- title: stack zot fix-fields -sidebar_position: 83 +sidebar_position: 84 --- # `stack zot fix-fields` diff --git a/docs/docs/cli/zot-fix-keys.md b/docs/docs/cli/zot-fix-keys.md index 67ae1af..120dbd0 100644 --- a/docs/docs/cli/zot-fix-keys.md +++ b/docs/docs/cli/zot-fix-keys.md @@ -1,6 +1,6 @@ --- title: stack zot fix-keys -sidebar_position: 82 +sidebar_position: 83 --- # `stack zot fix-keys` diff --git a/docs/docs/cli/zot-verify-parity.md b/docs/docs/cli/zot-verify-parity.md index 4fd4338..8637bcb 100644 --- a/docs/docs/cli/zot-verify-parity.md +++ b/docs/docs/cli/zot-verify-parity.md @@ -1,6 +1,6 @@ --- title: stack zot verify-parity -sidebar_position: 84 +sidebar_position: 85 --- # `stack zot verify-parity` diff --git a/docs/docs/cli/zot.md b/docs/docs/cli/zot.md index 190db74..87587ae 100644 --- a/docs/docs/cli/zot.md +++ b/docs/docs/cli/zot.md @@ -1,6 +1,6 @@ --- title: stack zot -sidebar_position: 79 +sidebar_position: 80 --- # `stack zot` diff --git a/src/bib/store.py b/src/bib/store.py index c73fa52..ee527db 100644 --- a/src/bib/store.py +++ b/src/bib/store.py @@ -613,6 +613,24 @@ class Store: con.commit() return added + def merge_extra(self, item_key: str, updates: dict[str, Any]) -> None: + """Merge *updates* into the item's ``extra_json`` (top-level keys + replace; everything else is kept). A missing item is a no-op.""" + con = self._con() + row = con.execute( + "SELECT extra_json FROM items WHERE key = ?", (item_key,) + ).fetchone() + if row is None: + return + current = json.loads(row[0] or "{}") if row[0] else {} + current.update(updates) + con.execute( + "UPDATE items SET extra_json = ?, " + "updated_at = strftime('%Y-%m-%dT%H:%M:%SZ','now') WHERE key = ?", + (json.dumps(current), item_key), + ) + con.commit() + def remove_tag(self, item_key: str, tag: str) -> None: """Remove a tag from an item.""" con = self._con() diff --git a/src/cli/llm.py b/src/cli/llm.py index 14fa0c9..5ebe3e4 100644 --- a/src/cli/llm.py +++ b/src/cli/llm.py @@ -1,5 +1,7 @@ """stack llm — local RAG over the library (index + fleet + chat serve).""" +from typing import Any + import typer app = typer.Typer(no_args_is_help=True) @@ -236,3 +238,103 @@ def vocab( typer.echo( f"vocabulary v{v.version}: {len(v)} themes, {len(v.retired)} retired ({v.source})" ) + + +def _tagging_runtime(cfg: Any) -> dict[str, Any]: + """Everything `stack llm tag` needs from the live stack — one place + the tests monkeypatch: the bib store, the pgvector chunk loader, the + theme-card vectors (embedded once per run through the pool), the + yes/no judge on the largest live host, and the model name recorded + in each item's state.""" + from conf.connect import bib + from llm.index import _engine + from llm.pool import HostPool, PoolEmbeddings, pick_model + from llm.tagger import card_vectors, make_judge, pg_chunks + from llm.vocab import load as load_vocab + + vocab = load_vocab() + pool = HostPool.from_config(cfg) + pool.check(cfg.embed_model) + cards = card_vectors(vocab, PoolEmbeddings(pool, cfg.embed_model).embed_documents) + judge = make_judge(cfg, pool) + with pool.acquire_generation() as host: + model = pick_model(cfg, pool, host) + return { + "store": bib(), + "vocab": vocab, + "load_chunks": pg_chunks(_engine(cfg)), + "card_vecs": cards, + "judge": judge, + "model": model, + } + + +@app.command() +def tag( + docket: str = typer.Option( + ..., "--docket", help="regulations.gov docket id, e.g. CMS-2026-2377." + ), + limit: int = typer.Option( + 0, "--limit", help="Stop after N comments (newest first; 0 = all)." + ), + force: bool = typer.Option( + False, "--force", help="Re-tag comments whose stored state is current." + ), + dry_run: bool = typer.Option( + False, "--dry-run", help="Compute and print, write nothing." + ), + top: int = typer.Option( + 8, "--top", help="Themes shortlisted per comment before judging." + ), + max_tags: int = typer.Option( + 4, "--max-tags", help="Most themes written per comment." + ), + min_confidence: float = typer.Option( + 0.0, + "--min-confidence", + help="Shortlist similarity below which a judged yes is not written.", + ), + verbose: bool = typer.Option( + False, "--verbose", help="Print every comment's tags." + ), +) -> None: + """Closed-vocabulary theme tagging of one docket's comments (P35): + shortlist by similarity to the theme cards, judge each candidate + yes/no on the largest live host with the scoring chunk as evidence, + record state in the item's extra_json, and replace its llm: tags. + Resumable — unchanged comments are skipped unless --force.""" + from llm import config as llm_config + from llm.tagger import run as run_tagging + + cfg = llm_config.load() + rt = _tagging_runtime(cfg) + + def progress(key: str, result: Any, why: str) -> None: + if result is None: + if verbose: + typer.echo(f"{key} {why}") + return + if verbose or dry_run: + typer.echo(f"{key} {', '.join(result.slugs) or '(none)'}") + + stats = run_tagging( + rt["store"], + vocab=rt["vocab"], + docket=docket, + load_chunks=rt["load_chunks"], + card_vecs=rt["card_vecs"], + judge=rt["judge"], + model=rt["model"], + limit=limit, + force=force, + dry_run=dry_run, + top=top, + max_tags=max_tags, + min_confidence=min_confidence, + progress=progress, + ) + typer.echo( + f"tag {docket} (vocab v{rt['vocab'].version}, {rt['model']}{', dry run' if dry_run else ''}): " + f"seen={stats['seen']} tagged={stats['tagged']} unchanged={stats['skipped_state']} " + f"no_chunks={stats['no_chunks']} tags_written={stats['tags_written']}" + ) diff --git a/src/llm/tagger.py b/src/llm/tagger.py new file mode 100644 index 0000000..1bfa3bf --- /dev/null +++ b/src/llm/tagger.py @@ -0,0 +1,369 @@ +"""Closed-vocabulary theme tagging of rulemaking comments (P35, #575/#576). + +For one comment the chain is: its already-indexed chunks (text + vector, +``langchain_pg_embedding`` ``comments`` collection) → cosine similarity +against every theme card (``llm.vocab.Theme.card`` embedded once per run) +→ the ``top`` themes shortlisted, each with the chunk that scored it → +one yes/no judgement per candidate on the largest live host, with that +chunk as the evidence → up to ``max_tags`` accepted themes, confidence = +the shortlist similarity. Nothing outside ``{yes, no}`` counts as ``no``. + +State lives on the bib item (``extra_json["llm_tags"]``: vocab version, +model, content hash, the accepted tags with confidence and evidence +chunk, and the shortlist with every verdict) so a run is resumable and a +re-run skips comments whose version + model + content are unchanged. +Write-back replaces exactly the item's ``llm:*`` tags and never touches +hand tags. + +Every collaborator is injected (``embed``, ``judge``, ``load_chunks``) so +the pure pieces run in tests without Ollama or pgvector; the CLI wires +the real ones (``make_judge``, ``card_vectors``, ``pg_chunks``). +""" + +from __future__ import annotations + +import hashlib +import json +import logging +import math +from dataclasses import asdict, dataclass +from datetime import datetime, timezone +from typing import Any, Callable, Iterable, Mapping, Sequence + +from llm.vocab import Theme, Vocab, split_tags + +log = logging.getLogger(__name__) + +Vector = Sequence[float] +Embed = Callable[[Sequence[str]], list[list[float]]] +Judge = Callable[[Theme, str], bool | None] +ChunkLoader = Callable[[str], list[tuple[int, str, list[float]]]] + +STATE_KEY = "llm_tags" + + +@dataclass(frozen=True) +class Candidate: + slug: str + score: float + chunk_idx: int + + +@dataclass(frozen=True) +class TagInfo: + confidence: float + evidence_chunk: int + + +@dataclass(frozen=True) +class TagResult: + key: str + tags: dict[str, TagInfo] + shortlisted: tuple[Candidate, ...] + judged: dict[str, bool | None] + content_hash: str + + @property + def slugs(self) -> list[str]: + return sorted(self.tags, key=lambda s: -self.tags[s].confidence) + + +# ── pure pieces ─────────────────────────────────────────────────────── + + +def cosine(a: Vector, b: Vector) -> float: + dot = sum(x * y for x, y in zip(a, b)) + na = math.sqrt(sum(x * x for x in a)) + nb = math.sqrt(sum(y * y for y in b)) + return dot / (na * nb) if na and nb else 0.0 + + +def shortlist( + chunk_vecs: Sequence[Vector], card_vecs: Mapping[str, Vector], *, top: int = 8 +) -> list[Candidate]: + """The ``top`` themes by their best cosine similarity to any chunk, + each with the index of the chunk that scored it (the evidence).""" + if not chunk_vecs: + return [] + out: list[Candidate] = [] + for slug, cv in card_vecs.items(): + best_i, best = 0, -1.0 + for i, v in enumerate(chunk_vecs): + s = cosine(v, cv) + if s > best: + best_i, best = i, s + out.append(Candidate(slug, round(best, 4), best_i)) + out.sort(key=lambda c: (-c.score, c.slug)) + return out[:top] + + +_SYSTEM = ( + "You decide whether a public comment letter on a Medicare physician fee " + "schedule rule addresses a given theme. Answer with exactly one word: yes " + "or no. Say yes only when the excerpt actually discusses the theme, not " + "when it merely mentions a related word in passing." +) + + +def judge_prompt(theme: Theme, evidence: str) -> list[dict]: + return [ + {"role": "system", "content": _SYSTEM}, + { + "role": "user", + "content": ( + f"Theme: {theme.label}\nDefinition: {theme.definition}\n" + f"Phrases letters use: {', '.join(theme.synonyms) or '—'}\n\n" + f"Excerpt from the comment:\n{evidence.strip()}\n\n" + "Does this comment address the theme? Answer yes or no." + ), + }, + ] + + +def parse_yes_no(reply: str) -> bool | None: + word = (reply or "").strip().strip(".!\"'").lower().split() + if not word: + return None + if word[0] in ("yes", "y"): + return True + if word[0] in ("no", "n"): + return False + return None + + +def content_hash(chunks: Sequence[str]) -> str: + h = hashlib.sha1() # noqa: S324 — change detection, not security + for c in chunks: + h.update(c.encode("utf-8", "replace")) + h.update(b"\x00") + return h.hexdigest()[:16] + + +def tag_comment( + key: str, + chunks: Sequence[str], + chunk_vecs: Sequence[Vector], + *, + vocab: Vocab, + card_vecs: Mapping[str, Vector], + judge: Judge, + top: int = 8, + max_tags: int = 4, + min_confidence: float = 0.0, +) -> TagResult: + cands = shortlist(chunk_vecs, card_vecs, top=top) + judged: dict[str, bool | None] = {} + tags: dict[str, TagInfo] = {} + for c in cands: + if c.slug not in vocab: + continue + verdict = judge(vocab.get(c.slug), chunks[c.chunk_idx]) + judged[c.slug] = verdict + if verdict and c.score >= min_confidence and len(tags) < max_tags: + tags[c.slug] = TagInfo(confidence=c.score, evidence_chunk=c.chunk_idx) + return TagResult(key, tags, tuple(cands), judged, content_hash(chunks)) + + +def state_matches( + extra: Mapping[str, Any], *, version: int, model: str, digest: str +) -> bool: + st = extra.get(STATE_KEY) or {} + return ( + st.get("version") == version + and st.get("model") == model + and st.get("content_hash") == digest + ) + + +def state_payload(result: TagResult, *, version: int, model: str) -> dict: + return { + "version": version, + "model": model, + "content_hash": result.content_hash, + "tagged_at": datetime.now(timezone.utc).isoformat(timespec="seconds"), + "tags": {s: asdict(i) for s, i in result.tags.items()}, + "shortlist": [ + { + "slug": c.slug, + "score": c.score, + "chunk": c.chunk_idx, + "verdict": result.judged.get(c.slug), + } + for c in result.shortlisted + ], + } + + +# ── bib side ────────────────────────────────────────────────────────── + + +def apply_tags( + store: Any, key: str, slugs: Iterable[str], *, vocab: Vocab +) -> tuple[int, int]: + """Make the item's ``llm:*`` tags exactly ``slugs``; hand tags untouched. + Returns ``(added, removed)``.""" + want = {vocab.tag(s) for s in slugs} + have, _hand = split_tags(store.get(key).tags) + removed = 0 + for t in have: + if t not in want: + store.remove_tag(key, t) + removed += 1 + added = store.add_tags(key, sorted(want - set(have))) if want - set(have) else 0 + return added, removed + + +def _extra(store: Any, key: str) -> dict: + row = ( + store._con() + .execute( # noqa: SLF001 + "SELECT extra_json FROM items WHERE key = ?", (key,) + ) + .fetchone() + ) + return json.loads(row[0] or "{}") if row and row[0] else {} + + +def docket_keys(store: Any, docket: str, *, limit: int = 0) -> list[str]: + """Comment item keys in *docket*, newest posted first.""" + con = store._con() # noqa: SLF001 + sql = ( + "SELECT i.key FROM items i " + "WHERE i.id IN (SELECT item_id FROM item_tags WHERE tag_id IN " + "(SELECT id FROM tags WHERE name = ?)) " + "AND i.url LIKE 'https://www.regulations.gov/comment/%' " + "ORDER BY i.date_published DESC, i.id DESC" + ) + if limit: + sql += f" LIMIT {int(limit)}" + return [r[0] for r in con.execute(sql, (f"reg-docket:{docket}",)).fetchall()] + + +def run( + store: Any, + *, + vocab: Vocab, + docket: str, + load_chunks: ChunkLoader, + card_vecs: Mapping[str, Vector], + judge: Judge, + model: str, + limit: int = 0, + force: bool = False, + dry_run: bool = False, + top: int = 8, + max_tags: int = 4, + min_confidence: float = 0.0, + progress: Callable[[str, TagResult | None, str], None] | None = None, +) -> dict[str, int]: + """Tag every comment in *docket* (newest first); resumable via the + item's stored state; ``dry_run`` computes and reports but writes + nothing.""" + stats = { + "seen": 0, + "tagged": 0, + "skipped_state": 0, + "no_chunks": 0, + "tags_written": 0, + } + for key in docket_keys(store, docket, limit=limit): + stats["seen"] += 1 + extra = _extra(store, key) + rows = load_chunks(key) + if not rows: + stats["no_chunks"] += 1 + if progress: + progress(key, None, "no-chunks") + continue + rows = sorted(rows, key=lambda r: r[0]) + texts = [t for _, t, _ in rows] + digest = content_hash(texts) + if not force and state_matches( + extra, version=vocab.version, model=model, digest=digest + ): + stats["skipped_state"] += 1 + if progress: + progress(key, None, "unchanged") + continue + result = tag_comment( + key, + texts, + [v for _, _, v in rows], + vocab=vocab, + card_vecs=card_vecs, + judge=judge, + top=top, + max_tags=max_tags, + min_confidence=min_confidence, + ) + stats["tagged"] += 1 + if not dry_run: + store.merge_extra( + key, + {STATE_KEY: state_payload(result, version=vocab.version, model=model)}, + ) + added, _removed = apply_tags(store, key, result.slugs, vocab=vocab) + stats["tags_written"] += added + if progress: + progress(key, result, "tagged") + return stats + + +# ── real collaborators (the CLI wires these) ────────────────────────── + + +def card_vectors(vocab: Vocab, embed: Embed) -> dict[str, list[float]]: + slugs = list(vocab.cards) + vecs = embed([vocab.cards[s] for s in slugs]) + return dict(zip(slugs, vecs)) + + +def make_judge( + cfg: Any, pool: Any, *, post: Callable[..., dict] | None = None +) -> Judge: + """A yes/no judge on the largest live host, ``temperature 0`` — the + same route ``llm.classify.closed_vocab_classifier`` takes.""" + from llm.classify import _default_post + from llm.pool import pick_model + + send = post or _default_post + pool.check(cfg.instruct_model) + + def judge(theme: Theme, evidence: str) -> bool | None: + with pool.acquire_generation() as host: + model = pick_model(cfg, pool, host) + data = send( + f"{host}/api/chat", + json={ + "model": model, + "messages": judge_prompt(theme, evidence), + "stream": False, + "options": {"num_ctx": cfg.chat_num_ctx, "temperature": 0}, + }, + ) + reply = data.get("message", {}).get("content", "") + verdict = parse_yes_no(reply) + if verdict is None: + log.info("judge: unparseable reply %r for %s", reply[:60], theme.slug) + return verdict + + return judge + + +def pg_chunks(engine: Any, collection: str = "comments") -> ChunkLoader: + """``load_chunks(key)`` over ``langchain_pg_embedding`` — the text and + vector of every chunk indexed for the item, in ``seq`` order.""" + from sqlalchemy import text as _text + + sql = _text( + "SELECT (e.cmetadata->>'seq')::int AS seq, e.document, e.embedding::text " + "FROM langchain_pg_embedding e JOIN langchain_pg_collection c ON c.uuid = e.collection_id " + "WHERE c.name = :collection AND e.cmetadata->>'item_key' = :key ORDER BY seq" + ) + + def load(key: str) -> list[tuple[int, str, list[float]]]: + with engine.begin() as con: + rows = con.execute(sql, {"collection": collection, "key": key}).fetchall() + return [(int(seq or 0), doc or "", json.loads(vec)) for seq, doc, vec in rows] + + return load diff --git a/tests/cli/test_llm_tag_cli.py b/tests/cli/test_llm_tag_cli.py new file mode 100644 index 0000000..14193ce --- /dev/null +++ b/tests/cli/test_llm_tag_cli.py @@ -0,0 +1,103 @@ +"""stack llm tag / vocab (#574, #575).""" + +from __future__ import annotations + +import pytest +from typer.testing import CliRunner + +import cli.llm as llm_cli +from bib.item import Source +from bib.store import Store +from cli import app +from llm.vocab import parse + +runner = CliRunner() + +VOCAB = parse( + "version: 1\nthemes:\n - slug: telehealth\n definition: Telehealth.\n synonyms: [telehealth]\n" + " - slug: drugs\n definition: Drugs.\n synonyms: [ASP]\n" +) + + +@pytest.fixture +def rt(monkeypatch, tmp_path): + store = Store(":memory:", storage_dir=tmp_path / "st") + key = store.upsert( + Source( + title="c1", + url="https://www.regulations.gov/comment/CMS-2026-2377-1", + date_published="2026-09-01", + ), + tags=["reg-docket:CMS-2026-2377", "source:regulations-gov"], + ) + judged = [] + + def judge(theme, evidence): + judged.append(theme.slug) + return theme.slug == "telehealth" + + runtime = { + "store": store, + "vocab": VOCAB, + "load_chunks": lambda k: ( + [(0, "telehealth text", [1.0, 0.0])] if k == key else [] + ), + "card_vecs": {"telehealth": [1.0, 0.0], "drugs": [0.0, 1.0]}, + "judge": judge, + "model": "m", + } + monkeypatch.setattr(llm_cli, "_tagging_runtime", lambda cfg: runtime) + monkeypatch.setattr("llm.config.load", lambda: object()) + try: + yield store, key, judged + finally: + store.close() + + +class TestTag: + def test_tags_and_reports(self, rt): + store, key, judged = rt + res = runner.invoke( + app, ["llm", "tag", "--docket", "CMS-2026-2377", "--verbose"] + ) + assert res.exit_code == 0, res.output + assert f"{key} telehealth" in res.output + assert "seen=1 tagged=1 unchanged=0 no_chunks=0 tags_written=1" in res.output + assert ( + "llm:telehealth" in store.get(key).tags + and "llm:drugs" not in store.get(key).tags + ) + assert judged == ["telehealth", "drugs"] + res = runner.invoke(app, ["llm", "tag", "--docket", "CMS-2026-2377"]) + assert "unchanged=1" in res.output + + def test_dry_run_prints_but_writes_nothing(self, rt): + store, key, _ = rt + res = runner.invoke( + app, ["llm", "tag", "--docket", "CMS-2026-2377", "--dry-run"] + ) + assert res.exit_code == 0, res.output + assert "dry run" in res.output and f"{key} telehealth" in res.output + assert not any(t.startswith("llm:") for t in store.get(key).tags) + + def test_docket_is_required(self): + assert runner.invoke(app, ["llm", "tag"]).exit_code != 0 + + +class TestVocab: + def test_lists_and_shows(self): + res = runner.invoke(app, ["llm", "vocab"]) + assert ( + res.exit_code == 0 + and "vocabulary v" in res.output + and "telehealth" in res.output + ) + res = runner.invoke(app, ["llm", "vocab", "--slug", "telehealth"]) + assert res.exit_code == 0 and "llm:telehealth" in res.output + assert runner.invoke(app, ["llm", "vocab", "--slug", "nope"]).exit_code != 0 + + def test_invalid_file(self, tmp_path): + p = tmp_path / "bad.yaml" + p.write_text("version: 1\nthemes: []\n") + res = runner.invoke(app, ["llm", "vocab", "--path", str(p)]) + assert res.exit_code == 1 and "invalid vocabulary" in res.output diff --git a/tests/llm/test_tagger.py b/tests/llm/test_tagger.py new file mode 100644 index 0000000..31962fb --- /dev/null +++ b/tests/llm/test_tagger.py @@ -0,0 +1,390 @@ +"""llm.tagger — shortlist, judge, state, write-back and the docket runner (#575/#576).""" + +from __future__ import annotations + +import json + +import pytest + +from bib.item import Source +from bib.store import Store +from llm.tagger import ( + Candidate, + TagResult, + apply_tags, + card_vectors, + content_hash, + cosine, + docket_keys, + judge_prompt, + make_judge, + parse_yes_no, + run, + shortlist, + state_matches, + state_payload, + tag_comment, +) +from llm.vocab import parse + +VOCAB = parse( + """ +version: 2 +themes: + - slug: telehealth + label: Telehealth + definition: Medicare telehealth services. + synonyms: [telehealth] + - slug: care-management + label: Care management + definition: Monthly care management codes. + synonyms: [CCM] + - slug: drugs + label: Part B drugs + definition: ASP drug payment. + synonyms: [ASP] +""" +) +CARDS = { + "telehealth": [1.0, 0.0, 0.0], + "care-management": [0.0, 1.0, 0.0], + "drugs": [0.0, 0.0, 1.0], +} + + +class TestPure: + def test_cosine(self): + assert cosine([1, 0], [1, 0]) == pytest.approx(1.0) + assert cosine([1, 0], [0, 1]) == pytest.approx(0.0) + assert cosine([0, 0], [1, 1]) == 0.0 + + def test_shortlist_best_chunk_per_theme(self): + chunks = [[0.9, 0.1, 0.0], [0.1, 0.9, 0.0]] + out = shortlist(chunks, CARDS, top=2) + assert [c.slug for c in out] == ["care-management", "telehealth"] or [ + c.slug for c in out + ] == ["telehealth", "care-management"] + by = {c.slug: c for c in out} + assert by["telehealth"].chunk_idx == 0 and by["care-management"].chunk_idx == 1 + assert all(isinstance(c, Candidate) and 0 < c.score <= 1 for c in out) + assert shortlist([], CARDS) == [] + + def test_judge_prompt_and_parse(self): + msgs = judge_prompt( + VOCAB.get("telehealth"), "We support audio-only telehealth." + ) + assert msgs[0]["role"] == "system" and "Telehealth" in msgs[1]["content"] + assert "audio-only telehealth" in msgs[1]["content"] + assert parse_yes_no("Yes.") is True and parse_yes_no(" no\n") is False + assert parse_yes_no("Maybe yes") is None and parse_yes_no("") is None + + def test_content_hash_is_order_sensitive(self): + assert content_hash(["a", "b"]) != content_hash(["b", "a"]) + assert len(content_hash(["a"])) == 16 + + def test_tag_comment_accepts_judged_yes_up_to_max(self): + chunks = ["telehealth text", "ccm text", "asp text"] + vecs = [[1.0, 0.0, 0.0], [0.0, 1.0, 0.0], [0.0, 0.0, 1.0]] + seen = [] + + def judge(theme, evidence): + seen.append((theme.slug, evidence)) + return theme.slug != "drugs" + + r = tag_comment( + "K", + chunks, + vecs, + vocab=VOCAB, + card_vecs=CARDS, + judge=judge, + top=3, + max_tags=1, + ) + assert isinstance(r, TagResult) and len(r.tags) == 1 + assert r.judged["drugs"] is False and any(v for v in r.judged.values()) + assert ( + "telehealth", + "telehealth text", + ) in seen # evidence is the scoring chunk + assert r.content_hash == content_hash(chunks) + + def test_min_confidence_filters_weak_matches(self): + chunks = ["x"] + vecs = [[0.6, 0.8, 0.0]] # cosine 0.6 with telehealth, 0.8 with care-management + r = tag_comment( + "K", + chunks, + vecs, + vocab=VOCAB, + card_vecs=CARDS, + judge=lambda t, e: True, + min_confidence=0.7, + ) + assert r.slugs == ["care-management"] + + def test_state(self): + r = tag_comment( + "K", + ["t"], + [[1.0, 0, 0]], + vocab=VOCAB, + card_vecs=CARDS, + judge=lambda t, e: True, + max_tags=1, + ) + payload = state_payload(r, version=2, model="m") + assert payload["tags"] == { + "telehealth": {"confidence": 1.0, "evidence_chunk": 0} + } + assert payload["shortlist"][0]["verdict"] is True and "tagged_at" in payload + assert state_matches( + {"llm_tags": payload}, version=2, model="m", digest=r.content_hash + ) + assert not state_matches( + {"llm_tags": payload}, version=3, model="m", digest=r.content_hash + ) + assert not state_matches({}, version=2, model="m", digest=r.content_hash) + + def test_card_vectors_embeds_every_card_once(self): + calls = [] + + def embed(texts): + calls.append(list(texts)) + return [[float(i)] for i in range(len(texts))] + + cv = card_vectors(VOCAB, embed) + assert set(cv) == {"telehealth", "care-management", "drugs"} and len(calls) == 1 + assert "Medicare telehealth services" in calls[0][0] + + +class TestJudge: + def test_make_judge_posts_to_largest_host_at_temperature_zero(self): + class Pool: + def check(self, model): + return ["http://h"] + + def vram(self, host): + return 0.0 + + def serves(self, host, model): + return False + + class _cm: + def __enter__(self): + return "http://h" + + def __exit__(self, *a): + return False + + def acquire_generation(self): + return self._cm() + + class Cfg: + instruct_model = "m" + instruct_model_large = "" + large_min_vram_gb = 20.0 + chat_num_ctx = 4096 + + sent = {} + + def post(url, json=None): + sent["url"], sent["json"] = url, json + return {"message": {"content": "Yes"}} + + judge = make_judge(Cfg(), Pool(), post=post) + assert judge(VOCAB.get("drugs"), "ASP add-on") is True + assert ( + sent["url"] == "http://h/api/chat" + and sent["json"]["options"]["temperature"] == 0 + ) + assert sent["json"]["model"] == "m" + + +def _store(tmp_path): + s = Store(":memory:", storage_dir=tmp_path / "st") + keys = {} + for i, (cid, date) in enumerate( + [ + ("CMS-2026-2377-1", "2026-09-01"), + ("CMS-2026-2377-2", "2026-09-05"), + ("CMS-2025-0304-9", "2025-09-01"), + ] + ): + docket = cid.rsplit("-", 1)[0] + keys[cid] = s.upsert( + Source( + title=cid, + url=f"https://www.regulations.gov/comment/{cid}", + date_published=date, + ), + tags=[f"reg-docket:{docket}", "source:regulations-gov", "topic:palliative"], + ) + return s, keys + + +class TestBibSide: + def test_docket_keys_newest_first(self, tmp_path): + s, keys = _store(tmp_path) + assert docket_keys(s, "CMS-2026-2377") == [ + keys["CMS-2026-2377-2"], + keys["CMS-2026-2377-1"], + ] + assert docket_keys(s, "CMS-2026-2377", limit=1) == [keys["CMS-2026-2377-2"]] + assert docket_keys(s, "NOPE") == [] + s.close() + + def test_apply_tags_replaces_only_llm_tags(self, tmp_path): + s, keys = _store(tmp_path) + k = keys["CMS-2026-2377-1"] + s.add_tags(k, ["llm:drugs"]) + added, removed = apply_tags( + s, k, ["telehealth", "care-management"], vocab=VOCAB + ) + assert (added, removed) == (2, 1) + tags = set(s.get(k).tags) + assert { + "llm:telehealth", + "llm:care-management", + "topic:palliative", + "reg-docket:CMS-2026-2377", + } <= tags + assert "llm:drugs" not in tags + assert apply_tags(s, k, ["telehealth", "care-management"], vocab=VOCAB) == ( + 0, + 0, + ) # idempotent + assert ( + apply_tags(s, k, [], vocab=VOCAB) == (0, 2) + and "topic:palliative" in s.get(k).tags + ) + s.close() + + def test_merge_extra(self, tmp_path): + s, keys = _store(tmp_path) + k = keys["CMS-2026-2377-1"] + s.merge_extra(k, {"a": 1}) + s.merge_extra(k, {"b": {"x": 2}}) + s.merge_extra("ZZZZZZZZ", {"c": 3}) # unknown key: no-op, no error + extra = json.loads( + s._con() + .execute("SELECT extra_json FROM items WHERE key=?", (k,)) + .fetchone()[0] + ) # noqa: SLF001 + assert extra["a"] == 1 and extra["b"] == {"x": 2} + s.close() + + +class TestRun: + def _chunks(self, keys): + def load(key): + if key == keys["CMS-2026-2377-1"]: + return [ + (1, "ccm text", [0.0, 1.0, 0.0]), + (0, "telehealth text", [1.0, 0.0, 0.0]), + ] + if key == keys["CMS-2026-2377-2"]: + return [] # not indexed yet + return [(0, "asp", [0.0, 0.0, 1.0])] + + return load + + def test_tags_persist_state_and_resume(self, tmp_path): + s, keys = _store(tmp_path) + events = [] + judge_calls = [] + + def judge(theme, evidence): + judge_calls.append(theme.slug) + return True + + stats = run( + s, + vocab=VOCAB, + docket="CMS-2026-2377", + load_chunks=self._chunks(keys), + card_vecs=CARDS, + judge=judge, + model="m", + top=2, + max_tags=2, + progress=lambda k, r, why: events.append((k, why)), + ) + assert stats == { + "seen": 2, + "tagged": 1, + "skipped_state": 0, + "no_chunks": 1, + "tags_written": 2, + } + k = keys["CMS-2026-2377-1"] + assert {"llm:telehealth", "llm:care-management"} <= set(s.get(k).tags) + extra = json.loads( + s._con() + .execute("SELECT extra_json FROM items WHERE key=?", (k,)) + .fetchone()[0] + ) # noqa: SLF001 + assert extra["llm_tags"]["version"] == 2 and extra["llm_tags"]["model"] == "m" + assert set(extra["llm_tags"]["tags"]) == {"telehealth", "care-management"} + assert (keys["CMS-2026-2377-2"], "no-chunks") in events + # second run: unchanged → skipped without judging + judge_calls.clear() + stats2 = run( + s, + vocab=VOCAB, + docket="CMS-2026-2377", + load_chunks=self._chunks(keys), + card_vecs=CARDS, + judge=judge, + model="m", + top=2, + ) + assert ( + stats2["skipped_state"] == 1 and stats2["tagged"] == 0 and judge_calls == [] + ) + # a new model re-tags; --force re-tags + assert ( + run( + s, + vocab=VOCAB, + docket="CMS-2026-2377", + load_chunks=self._chunks(keys), + card_vecs=CARDS, + judge=judge, + model="m2", + top=2, + )["tagged"] + == 1 + ) + assert ( + run( + s, + vocab=VOCAB, + docket="CMS-2026-2377", + load_chunks=self._chunks(keys), + card_vecs=CARDS, + judge=judge, + model="m2", + top=2, + force=True, + )["tagged"] + == 1 + ) + s.close() + + def test_dry_run_writes_nothing(self, tmp_path): + s, keys = _store(tmp_path) + stats = run( + s, + vocab=VOCAB, + docket="CMS-2026-2377", + load_chunks=self._chunks(keys), + card_vecs=CARDS, + judge=lambda t, e: True, + model="m", + dry_run=True, + ) + assert stats["tagged"] == 1 and stats["tags_written"] == 0 + k = keys["CMS-2026-2377-1"] + assert not any(t.startswith("llm:") for t in s.get(k).tags) + s.close()